API for baldur
Bayesian Hierarchical Modeling for Label-Free Proteomics
| Global functions | |
|---|---|
| %>% | Man page |
| .onLoad | Source code |
| baldur | Man page |
| baldur-package | Man page |
| bayesian_testing | Source code |
| build_print | Source code |
| calc_loading_size | Source code |
| calculate_mean_sd_trends | Man page Source code |
| check_column_directionality | Source code |
| check_contrast | Source code |
| check_contrast_and_design | Source code |
| check_design | Source code |
| check_design_aux | Source code |
| check_id_col | Source code |
| check_matrix | Source code |
| check_target | Source code |
| coef.lgmr | Man page Source code |
| contrast_to_comps | Source code |
| correct_dups | Source code |
| empirical_bayes | Man page |
| estimate_beta | Man page Source code |
| estimate_beta.glm | Man page Source code |
| estimate_beta.lgmr | Man page Source code |
| estimate_error | Source code |
| estimate_gamma_hyperparameters | Man page Source code |
| estimate_gamma_hyperparameters.glm | Man page Source code |
| estimate_gamma_hyperparameters.lgmr | Man page Source code |
| estimate_uncertainty | Man page Source code |
| estimate_uncertainty.glm | Man page Source code |
| estimate_uncertainty.lgmr | Man page |
| fit_gamma_regression | Man page Source code |
| fit_lgmr | Man page Source code |
| generate_stan_data_input | Source code |
| get_conditions | Source code |
| infer_data_and_decision_model | Man page Source code |
| lgmr_model | Man page |
| lgmr_plotting | Man page |
| mu_std_inputs | Source code |
| plot_gamma | Man page Source code |
| plot_gamma_regression | Man page Source code |
| plot_lgmr_regression | Man page Source code |
| plot_mean_sd_trend | Source code |
| plot_regression_field | Man page Source code |
| plot_sa | Man page Source code |
| plot_volcano | Man page Source code |
| print.lgmr | Man page Source code |
| psrn | Man page Source code |
| set_print_names | Source code |
| stan_nse_wrapper | Source code |
| stan_summary | Source code |
| ups | Man page |
| weakly_informative | Man page |
| yeast | Man page |
