runTest | R Documentation |
Runs the test defined in a predictionTest
or
baselineAlgTest
object
runTest(object, X, y, ...)
## S4 method for signature 'PLSRTest'
runTest(object, X, y)
## S4 method for signature 'ridgeRegressionTest'
runTest(object, X, y)
## S4 method for signature 'baselineAlgTest'
runTest(object, X, y, predictionTest, postproc, verbose = FALSE)
object |
An object of class |
X |
A matrix. The spectra to use in the test |
y |
A vector or matrix. The response(s) to use in the test |
predictionTest |
A |
postproc |
A function, used to postprocess the baseline corrected spectra prior to prediction testing. The function should take a matrix of spectra as its only argument, and return a matrix of postprocessed spectra |
verbose |
Logical, specifying whether the test should print out
progress information. Default is |
... |
Other arguments. Currently only used by the
|
runTest
returns an object of class
predictionResult
or baselineAlgResult
.
signature(object = "baselineAlgTest")
Baseline corrects the spectra, optionally postprocesses them, and runs a prediction test on the corrected spectra.
signature(object = "PLSRTest")
Runs PLSR on the data and calculates the cross-validated RMSEP
signature(object = "ridgeRegressionTest")
Runs ridge regression on the data and calculates the GCV
Bjørn-Helge Mevik and Kristian Hovde Liland
baselineAlgTest
,
predictionTest
, PLSRTest
,
ridgeRegressionTest
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