Man pages for batchmix
Semi-Supervised Bayesian Mixture Models Incorporating Batch Correction
| batchmix-package | Bayesian Mixture Modelling for Joint Model-Based... |
| batchSemiSupervisedMixtureModel | Batch semisupervised mixture model |
| calcAllocProb | Calculate allocation probabilities |
| checkDataGenerationInputs | Check data generation inputs |
| checkProposalWindows | Check proposal windows |
| collectAcceptanceRates | Collect acceptance rate |
| continueChain | Continue chain |
| continueChains | Continue chains |
| createSimilarityMat | Create Similarity Matrix |
| gammaLogLikelihood | Gamma log-likelihood |
| generateBatchData | Generate batch data |
| generateBatchDataLogPoisson | Generate batch data |
| generateBatchDataMVT | Generate batch data from a multivariate t distribution |
| generateBatchDataVaryingRepresentation | Generate batch data |
| generateGroupIDsInSimulator | Generate group IDs |
| generateInitialLabels | Generate initial labels |
| getLikelihood | Get likelihood |
| getSampledBatchScale | Get sampled batch shift |
| getSampledBatchShift | Get sampled batch shift |
| getSampledClusterMeans | Get sampled cluster means |
| invGammaLogLikelihood | Inverse gamma log-likelihood |
| invWishartLogLikelihood | Inverse-Wishart log-likelihood |
| minVI | Minimium VI |
| plotAcceptanceRates | Plot acceptance rates |
| plotLikelihoods | Plot likelihoods |
| plotSampledBatchMeans | Plot sampled batch means |
| plotSampledBatchScales | Plot sampled batch scales |
| plotSampledClusterMeans | Plot sampled cluster means |
| plotSampledParameter | Plot sampled vector parameter |
| predictClass | Predict class |
| predictFromMultipleChains | Predict from multiple MCMC chains |
| prepareInitialParameters | Prepare initial values |
| processMCMCChain | Process MCMC chain |
| processMCMCChains | Process MCMC chains |
| rStickBreakingPrior | Random Draw From Stick Breaking Prior |
| runBatchMix | Run Batch Mixture Model |
| runMCMCChains | Run MCMC Chains |
| sampleMVN | Sample mixture of multivariate normal distributions with... |
| sampleMVT | Sample mixture of multivariate t-distributions with batch... |
| samplePriorLabels | Sample prior labels |
| sampleSemisupervisedMVN | Sample semi-supervised MVN Mixture model |
| sampleSemisupervisedMVT | Sample semi-supervised MVT Mixture model |
| VI.lb | Minimum VI lower bound |
| wishartLogLikelihood | Wishart log-likelihood |
