bayesMCClust: Mixtures-of-Experts Markov Chain Clustering and Dirichlet Multinomial Clustering

This package provides various Markov Chain Monte Carlo (MCMC) sampler for model-based clustering of discrete-valued time series obtained by observing a categorical variable with several states (in a Bayesian approach). In order to analyze group membership, we provide also an extension to the approaches by formulating a probabilistic model for the latent group indicators within the Bayesian classification rule using a multinomial logit model.

Author
Christoph Pamminger <christoph.pamminger@gmail.com>
Date of publication
2012-01-31 10:57:02
Maintainer
Christoph Pamminger <christoph.pamminger@gmail.com>
License
GPL-2
Version
1.0

View on CRAN

Man pages

bayesMCClust-package
Mixtures-of-Experts Markov Chain Clustering and Dirichlet...
calcAllocations
Computes Group Sizes, Group Membership and Individual...
calcEntropy
Calculates the Entropy of a Given Classification
calcEquiDist
Calculates (And Plots) the Stationary Distribution (Steady...
calcLongRunDist
Calculates And Plots the Long-Run Distribution Over the...
calcMSCrit
Calculates Model Selection Criteria For Several (Independent)...
calcNumEff
Calculates Inefficiency Factors of the MCMC Draws Obtained...
calcParMatDMC
Calculates the Posterior Expectation of the Cluster-Specific...
calcRegCoeffs
Calculates Posterior Expectations, Standard Deviations and...
calcSegmentationPower
Calculates the 'Segmentation Power' of the Specified...
calcTransProbs
Calculates the Posterior Expectation and Standard Deviations...
calcVariationDMC
Analyses How Much Unobserved Heterogeneity Is Present in the...
dmClustering
Dirichlet Multinomial Clustering With And Without...
LMEntryPaperData
Data From Fruehwirth-Schnatter et al. (2011): "Labor market...
MCCExampleData
A Small MCC/DMC Example Data Set
MCCExtExampleData
An Extended MCC/DMC Example Data Set Including Covariates
mcClustering
Markov Chain Clustering With And Without Mixtures-of-Experts...
MNLAuxMix
Bayesian Multinomial Logit Regression Using Auxiliary Mixture...
plotLikeliPaths
Plots Paths of Likelihoods And (Prior) Densities
plotScatter
Produces Scatter Plots of MCMC Draws
plotTransProbs
Produces Balloon Plots and LaTeX-Style Tables of the...
plotTypicalMembers
Plots Time Series of 'Typical' Group Members
transformDataToNjki
Transform Markov Chain (Time Series) Data Into Transition...

Files in this package

bayesMCClust
bayesMCClust/MD5
bayesMCClust/R
bayesMCClust/R/plotTypicalMembers.R
bayesMCClust/R/plotTransProbs.R
bayesMCClust/R/plotScatter.R
bayesMCClust/R/plotLikeliPaths.R
bayesMCClust/R/MNLAuxMix.R
bayesMCClust/R/mcClustExtended.R
bayesMCClust/R/mcClust.R
bayesMCClust/R/dmClustExtended.R
bayesMCClust/R/dmClust.R
bayesMCClust/R/dataListToNjki.R
bayesMCClust/R/dataFrameToNjki.R
bayesMCClust/R/calcVariationDMC.R
bayesMCClust/R/calcTransProbs.R
bayesMCClust/R/calcSegmentationPower.R
bayesMCClust/R/calcRegCoeffs.R
bayesMCClust/R/calcParMatDMC.R
bayesMCClust/R/calcNumEff.R
bayesMCClust/R/calcMSCritMCCExt.R
bayesMCClust/R/calcMSCritMCC.R
bayesMCClust/R/calcMSCritDMCExt.R
bayesMCClust/R/calcMSCritDMC.R
bayesMCClust/R/calcLongRunDist.R
bayesMCClust/R/calcEquiDist.R
bayesMCClust/R/calcEntropy.R
bayesMCClust/R/calcAllocationsMNL.R
bayesMCClust/R/calcAllocationsMCCExt.R
bayesMCClust/R/calcAllocationsMCC.R
bayesMCClust/R/calcAllocationsDMCExt.R
bayesMCClust/R/calcAllocationsDMC.R
bayesMCClust/R/bayesMCClust-internal.R
bayesMCClust/NAMESPACE
bayesMCClust/man
bayesMCClust/man/transformDataToNjki.Rd
bayesMCClust/man/plotTypicalMembers.Rd
bayesMCClust/man/plotTransProbs.Rd
bayesMCClust/man/plotScatter.Rd
bayesMCClust/man/plotLikeliPaths.Rd
bayesMCClust/man/MNLAuxMix.Rd
bayesMCClust/man/mcClustering.Rd
bayesMCClust/man/MCCExtExampleData.Rd
bayesMCClust/man/MCCExampleData.Rd
bayesMCClust/man/LMEntryPaperData.Rd
bayesMCClust/man/dmClustering.Rd
bayesMCClust/man/calcVariationDMC.Rd
bayesMCClust/man/calcTransProbs.Rd
bayesMCClust/man/calcSegmentationPower.Rd
bayesMCClust/man/calcRegCoeffs.Rd
bayesMCClust/man/calcParMatDMC.Rd
bayesMCClust/man/calcNumEff.Rd
bayesMCClust/man/calcMSCrit.Rd
bayesMCClust/man/calcLongRunDist.Rd
bayesMCClust/man/calcEquiDist.Rd
bayesMCClust/man/calcEntropy.Rd
bayesMCClust/man/calcAllocations.Rd
bayesMCClust/man/bayesMCClust-package.Rd
bayesMCClust/DESCRIPTION
bayesMCClust/data
bayesMCClust/data/MCCExtExampleData.rda
bayesMCClust/data/MCCExampleData.rda
bayesMCClust/data/LMEntryPaperData.rda
bayesMCClust/data/datalist