bayesMCClust: Mixtures-of-Experts Markov Chain Clustering and Dirichlet Multinomial Clustering

This package provides various Markov Chain Monte Carlo (MCMC) sampler for model-based clustering of discrete-valued time series obtained by observing a categorical variable with several states (in a Bayesian approach). In order to analyze group membership, we provide also an extension to the approaches by formulating a probabilistic model for the latent group indicators within the Bayesian classification rule using a multinomial logit model.

AuthorChristoph Pamminger <christoph.pamminger@gmail.com>
Date of publication2012-01-31 10:57:02
MaintainerChristoph Pamminger <christoph.pamminger@gmail.com>
LicenseGPL-2
Version1.0

View on CRAN

Man pages

bayesMCClust-package: Mixtures-of-Experts Markov Chain Clustering and Dirichlet...

calcAllocations: Computes Group Sizes, Group Membership and Individual...

calcEntropy: Calculates the Entropy of a Given Classification

calcEquiDist: Calculates (And Plots) the Stationary Distribution (Steady...

calcLongRunDist: Calculates And Plots the Long-Run Distribution Over the...

calcMSCrit: Calculates Model Selection Criteria For Several (Independent)...

calcNumEff: Calculates Inefficiency Factors of the MCMC Draws Obtained...

calcParMatDMC: Calculates the Posterior Expectation of the Cluster-Specific...

calcRegCoeffs: Calculates Posterior Expectations, Standard Deviations and...

calcSegmentationPower: Calculates the 'Segmentation Power' of the Specified...

calcTransProbs: Calculates the Posterior Expectation and Standard Deviations...

calcVariationDMC: Analyses How Much Unobserved Heterogeneity Is Present in the...

dmClustering: Dirichlet Multinomial Clustering With And Without...

LMEntryPaperData: Data From Fruehwirth-Schnatter et al. (2011): "Labor market...

MCCExampleData: A Small MCC/DMC Example Data Set

MCCExtExampleData: An Extended MCC/DMC Example Data Set Including Covariates

mcClustering: Markov Chain Clustering With And Without Mixtures-of-Experts...

MNLAuxMix: Bayesian Multinomial Logit Regression Using Auxiliary Mixture...

plotLikeliPaths: Plots Paths of Likelihoods And (Prior) Densities

plotScatter: Produces Scatter Plots of MCMC Draws

plotTransProbs: Produces Balloon Plots and LaTeX-Style Tables of the...

plotTypicalMembers: Plots Time Series of 'Typical' Group Members

transformDataToNjki: Transform Markov Chain (Time Series) Data Into Transition...

Files in this package

bayesMCClust
bayesMCClust/MD5
bayesMCClust/R
bayesMCClust/R/plotTypicalMembers.R bayesMCClust/R/plotTransProbs.R bayesMCClust/R/plotScatter.R bayesMCClust/R/plotLikeliPaths.R bayesMCClust/R/MNLAuxMix.R bayesMCClust/R/mcClustExtended.R bayesMCClust/R/mcClust.R bayesMCClust/R/dmClustExtended.R bayesMCClust/R/dmClust.R bayesMCClust/R/dataListToNjki.R bayesMCClust/R/dataFrameToNjki.R bayesMCClust/R/calcVariationDMC.R bayesMCClust/R/calcTransProbs.R bayesMCClust/R/calcSegmentationPower.R bayesMCClust/R/calcRegCoeffs.R bayesMCClust/R/calcParMatDMC.R bayesMCClust/R/calcNumEff.R bayesMCClust/R/calcMSCritMCCExt.R bayesMCClust/R/calcMSCritMCC.R bayesMCClust/R/calcMSCritDMCExt.R bayesMCClust/R/calcMSCritDMC.R bayesMCClust/R/calcLongRunDist.R bayesMCClust/R/calcEquiDist.R bayesMCClust/R/calcEntropy.R bayesMCClust/R/calcAllocationsMNL.R bayesMCClust/R/calcAllocationsMCCExt.R bayesMCClust/R/calcAllocationsMCC.R bayesMCClust/R/calcAllocationsDMCExt.R bayesMCClust/R/calcAllocationsDMC.R bayesMCClust/R/bayesMCClust-internal.R
bayesMCClust/NAMESPACE
bayesMCClust/man
bayesMCClust/man/transformDataToNjki.Rd bayesMCClust/man/plotTypicalMembers.Rd bayesMCClust/man/plotTransProbs.Rd bayesMCClust/man/plotScatter.Rd bayesMCClust/man/plotLikeliPaths.Rd bayesMCClust/man/MNLAuxMix.Rd bayesMCClust/man/mcClustering.Rd bayesMCClust/man/MCCExtExampleData.Rd bayesMCClust/man/MCCExampleData.Rd bayesMCClust/man/LMEntryPaperData.Rd bayesMCClust/man/dmClustering.Rd bayesMCClust/man/calcVariationDMC.Rd bayesMCClust/man/calcTransProbs.Rd bayesMCClust/man/calcSegmentationPower.Rd bayesMCClust/man/calcRegCoeffs.Rd bayesMCClust/man/calcParMatDMC.Rd bayesMCClust/man/calcNumEff.Rd bayesMCClust/man/calcMSCrit.Rd bayesMCClust/man/calcLongRunDist.Rd bayesMCClust/man/calcEquiDist.Rd bayesMCClust/man/calcEntropy.Rd bayesMCClust/man/calcAllocations.Rd bayesMCClust/man/bayesMCClust-package.Rd
bayesMCClust/DESCRIPTION
bayesMCClust/data
bayesMCClust/data/MCCExtExampleData.rda
bayesMCClust/data/MCCExampleData.rda
bayesMCClust/data/LMEntryPaperData.rda
bayesMCClust/data/datalist

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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