check_chains: Checking chain convergence

In bayesnec: A Bayesian No-Effect- Concentration (NEC) Algorithm

Checking chain convergence

Description

Plots HMC chains for a bayesnecfit or bayesmanecfit model fit as returned by bnec.

Usage

check_chains(x, ...)

## S3 method for class 'bayesnecfit'
check_chains(x, ...)

## S3 method for class 'bayesmanecfit'
check_chains(x, filename = NA, ...)

Arguments

x	An object of class bayesnecfit or bayesmanecfit as returned by bnec.
...	Unused.
filename	An optional character vector to be used as a pdf filename in the case of a bayesmanecfit. Any non empty character string will indicate the user wants to save the plots.

Value

No return value, generates a plot or writes a pdf to file.

Examples

## Not run: 
library(bayesnec)
check_chains(manec_example)
nec4param <- pull_out(manec_example, model = "nec4param")
check_chains(nec4param)

## End(Not run)

bayesnec documentation built on Aug. 21, 2025, 5:46 p.m.