bbmle: Tools for General Maximum Likelihood Estimation

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Methods and functions for fitting maximum likelihood models in R. This package modifies and extends the 'mle' classes in the 'stats4' package.

Author
Ben Bolker <bolker@mcmaster.ca>, R Development Core Team
Date of publication
2016-02-11 16:57:55
Maintainer
Ben Bolker <bolker@mcmaster.ca>
License
GPL
Version
1.0.18

View on CRAN

Man pages

as.data.frame.profile.mle2
convert profile to data frame
BIC-methods
Log likelihoods and model selection for mle2 objects
call.to.char
Convert calls to character
get.mnames
extract model names
ICtab
Compute table of information criteria and auxiliary info
mle2
Maximum Likelihood Estimation
mle2.options
Options for maximum likelihood estimation
mle-class
Class "mle2". Result of Maximum Likelihood Estimation.
namedrop
drop unneeded names from list elements
parnames
get and set parameter names
predict-methods
Predicted values from an mle2 fit
profile-methods
Likelihood profiles
profile.mle-class
Methods for likelihood profiles
relist
reconstruct the structure of a list
sbinom
Abstract definitions of distributions
slice
Calculate likelihood "slices"
slice.mle-class
likelihood-surface slices
strwrapx
Wrap strings at white space and + symbols
summary.mle-class
Class "summary.mle2", summary of "mle2" objects

Files in this package

bbmle
bbmle/TODO
bbmle/inst
bbmle/inst/NEWS.Rd
bbmle/inst/vignetteData
bbmle/inst/vignetteData/orob1.rda
bbmle/inst/doc
bbmle/inst/doc/mle2.Rnw
bbmle/inst/doc/quasi.R
bbmle/inst/doc/quasi.pdf
bbmle/inst/doc/quasi.Rnw
bbmle/inst/doc/mle2.R
bbmle/inst/doc/mle2.pdf
bbmle/inst/unitTests
bbmle/inst/unitTests/Makefile
bbmle/inst/unitTests/boundstest.R
bbmle/tests
bbmle/tests/profbound.R
bbmle/tests/binomtest1.Rout
bbmle/tests/test-relist1.R
bbmle/tests/testbounds.R
bbmle/tests/Makefile
bbmle/tests/testparpred.R
bbmle/tests/parscale.R
bbmle/tests/gradient_vecpar_profile.R
bbmle/tests/testenv.Rout.save
bbmle/tests/richards.Rout.save
bbmle/tests/mkout
bbmle/tests/richards.R
bbmle/tests/predict.Rout.save
bbmle/tests/test-relist1.Rout.save
bbmle/tests/BIC.Rout.save
bbmle/tests/startvals.R
bbmle/tests/testparpred.Rout.save
bbmle/tests/testbounds.Rout.save
bbmle/tests/RUnit-tests.R
bbmle/tests/formulatest.R
bbmle/tests/formulatest.Rout.save
bbmle/tests/eval.R
bbmle/tests/optimx.Rout.save
bbmle/tests/startvals2.Rout.save
bbmle/tests/testderiv.R
bbmle/tests/profbound.Rout.save
bbmle/tests/testenv.R
bbmle/tests/predict.R
bbmle/tests/makesavefiles
bbmle/tests/ICtab.Rout.save
bbmle/tests/order.Rout.save
bbmle/tests/BIC.R
bbmle/tests/testderiv.Rout.save
bbmle/tests/controleval.Rout.save
bbmle/tests/optimizers.Rout.save
bbmle/tests/optimizers.R
bbmle/tests/update.R
bbmle/tests/methods.R
bbmle/tests/startvals.Rout.save
bbmle/tests/binomtest1.Rout.save
bbmle/tests/ICtab.R
bbmle/tests/grtest1.Rout.save
bbmle/tests/binomtest1.R
bbmle/tests/mortanal.Rout.save
bbmle/tests/methods.Rout.save
bbmle/tests/optimize.R
bbmle/tests/startvals2.R
bbmle/tests/update.Rout.save
bbmle/tests/glmcomp.R
bbmle/tests/gradient_vecpar_profile.Rout.save
bbmle/tests/testbounds.Rout
bbmle/tests/parscale.Rout
bbmle/tests/optimize.Rout.save
bbmle/tests/tmptest.R
bbmle/tests/grtest1.R
bbmle/tests/controleval.R
bbmle/tests/doRUnit.R
bbmle/tests/tmptest.Rout.save
bbmle/tests/eval.Rout.save
bbmle/tests/glmcomp.Rout.save
bbmle/tests/parscale.Rout.save
bbmle/tests/mortanal.R
bbmle/tests/order.R
bbmle/tests/optimx.R
bbmle/NAMESPACE
bbmle/NEWS
bbmle/R
bbmle/R/IC.R
bbmle/R/dists.R
bbmle/R/mle2-methods.R
bbmle/R/predict.R
bbmle/R/profile.R
bbmle/R/slice.R
bbmle/R/mle.R
bbmle/R/update.R
bbmle/R/confint.R
bbmle/R/mle2-class.R
bbmle/vignettes
bbmle/vignettes/mle2.Rnw
bbmle/vignettes/mle2.bib
bbmle/vignettes/chicago.bst
bbmle/vignettes/clean
bbmle/vignettes/quasi.Rnw
bbmle/vignettes/cc-attrib-nc.png
bbmle/MD5
bbmle/build
bbmle/build/vignette.rds
bbmle/DESCRIPTION
bbmle/man
bbmle/man/get.mnames.Rd
bbmle/man/BIC-methods.Rd
bbmle/man/profile-methods.Rd
bbmle/man/as.data.frame.profile.mle2.Rd
bbmle/man/summary.mle-class.Rd
bbmle/man/profile.mle-class.Rd
bbmle/man/parnames.Rd
bbmle/man/ICtab.Rd
bbmle/man/mle-class.Rd
bbmle/man/mle2.options.Rd
bbmle/man/strwrapx.Rd
bbmle/man/sbinom.Rd
bbmle/man/call.to.char.Rd
bbmle/man/mle2.Rd
bbmle/man/namedrop.Rd
bbmle/man/slice.Rd
bbmle/man/predict-methods.Rd
bbmle/man/slice.mle-class.Rd
bbmle/man/relist.Rd