bdsmatrix: Routines for Block Diagonal Symmetric matrices

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This is a special case of sparse matrices, used by coxme

Author
Terry Therneau
Date of publication
2014-08-22 21:20:31
Maintainer
Terry Therneau <therneau@mayo.edu>
License
LGPL-2
Version
1.3-2
URLs

View on CRAN

Man pages

as.matrix.bdsmatrix
Convert a bdsmatrix to a ordinary (dense) matrix
backsolve
Solve an Upper or Lower Triangular System
bdsBlock
Block diagonal matrices.
bdsI
Sparse identity matrices
bdsmatrix
Create a sparse symmetric block diagonal matrix object
bdsmatrix-class
Class "bdsmatrix"
bdsmatrix.ibd
Create a bdsmatrix from a list
bdsmatrix.reconcile
Ensure alignment of two bdsmatrix objects
gchol
Generalized Cholesky decompostion
gchol.bdsmatrix-class
Class "gchol.bdsmatrix"
gchol-class
Class "gchol"
listbdsmatrix
List out a bdsmatrix as row/col/value triplets
solve.bdsmatrix
Solve a matrix equation using the generalized Cholesky...
solve.gchol
Solve a matrix equation using the generalized Cholesky...

Files in this package

bdsmatrix
bdsmatrix/inst
bdsmatrix/inst/NEWS.Rd
bdsmatrix/inst/COPYRIGHTS
bdsmatrix/inst/include
bdsmatrix/inst/include/bdsmatrix.h
bdsmatrix/inst/include/bdsmatrix_stub.h
bdsmatrix/tests
bdsmatrix/tests/gtest.R
bdsmatrix/tests/reconcile.R
bdsmatrix/tests/corner2.R
bdsmatrix/tests/tinv.R
bdsmatrix/tests/chtest2.R
bdsmatrix/tests/corner2.Rout.save
bdsmatrix/tests/nullr.Rout.save
bdsmatrix/tests/gtest2.R
bdsmatrix/tests/tinv.Rout.save
bdsmatrix/tests/bdstest.Rout.save
bdsmatrix/tests/backsolvetest.R
bdsmatrix/tests/chtest.Rout.save
bdsmatrix/tests/nullr.R
bdsmatrix/tests/gtest2.Rout.save
bdsmatrix/tests/reconcile.Rout.save
bdsmatrix/tests/chtest2.Rout.save
bdsmatrix/tests/matrix.Rout.save
bdsmatrix/tests/backsolvetest.Rout.save
bdsmatrix/tests/gtest.Rout.save
bdsmatrix/tests/bdstest.R
bdsmatrix/tests/corner.Rout.save
bdsmatrix/tests/chtest.R
bdsmatrix/tests/matrix.R
bdsmatrix/tests/corner.R
bdsmatrix/src
bdsmatrix/src/R_init_bdsmatrix.c
bdsmatrix/src/bdsmatrix_index3.c
bdsmatrix/src/bdsmatrix_prod.c
bdsmatrix/src/cholesky5.c
bdsmatrix/src/bdsmatrix_prod4.c
bdsmatrix/src/bdsmatrix_index1.c
bdsmatrix/src/bdsmatrix.h
bdsmatrix/src/chsolve5.c
bdsmatrix/src/gcback.c
bdsmatrix/src/bdsmatrix_prod3.c
bdsmatrix/src/chinv5.c
bdsmatrix/src/gchol_bds.c
bdsmatrix/src/gchol.c
bdsmatrix/src/chsolve4.c
bdsmatrix/src/bdsS.h
bdsmatrix/src/dmatrix.c
bdsmatrix/src/bdsmatrix_prod2.c
bdsmatrix/src/chinv4.c
bdsmatrix/src/bdsmatrix_index2.c
bdsmatrix/src/cholesky4.c
bdsmatrix/NAMESPACE
bdsmatrix/R
bdsmatrix/R/bdsBlock.R
bdsmatrix/R/gchol.bdsmatrix.R
bdsmatrix/R/gchol.R
bdsmatrix/R/solve.gchol.bdsmatrix.R
bdsmatrix/R/solve.gchol.R
bdsmatrix/R/multiply.bdsmatrix.R
bdsmatrix/R/bdsmatrix.R
bdsmatrix/R/diag.bdsmatrix.R
bdsmatrix/R/as.matrix.bdsmatrix.R
bdsmatrix/R/bdsI.R
bdsmatrix/R/bdsmatrix.reconcile.R
bdsmatrix/R/bdsmatrix.ibd.R
bdsmatrix/R/solve.bdsmatrix.R
bdsmatrix/R/backsolve.R
bdsmatrix/R/listbdsmatrix.R
bdsmatrix/MD5
bdsmatrix/DESCRIPTION
bdsmatrix/man
bdsmatrix/man/bdsmatrix.ibd.Rd
bdsmatrix/man/bdsmatrix.Rd
bdsmatrix/man/solve.gchol.Rd
bdsmatrix/man/bdsBlock.Rd
bdsmatrix/man/as.matrix.bdsmatrix.Rd
bdsmatrix/man/backsolve.Rd
bdsmatrix/man/bdsI.Rd
bdsmatrix/man/gchol.bdsmatrix-class.Rd
bdsmatrix/man/bdsmatrix-class.Rd
bdsmatrix/man/bdsmatrix.reconcile.Rd
bdsmatrix/man/gchol.Rd
bdsmatrix/man/listbdsmatrix.Rd
bdsmatrix/man/solve.bdsmatrix.Rd
bdsmatrix/man/gchol-class.Rd