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beautier: 'BEAUti' from R
'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAUti 2' (which is part of 'BEAST2') is a GUI tool that allows users to specify the many possible setups and generates the XML file 'BEAST2' needs to run. This package provides a way to create 'BEAST2' input files without active user input, but using R function calls instead.
Getting started
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Package details |
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| Author | Richèl J.C. Bilderbeek [aut, cre] (<https://orcid.org/0000-0003-1107-7049>), Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), David Winter [rev] (David reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), Paul Van Els [ctb] (<https://orcid.org/0000-0002-9499-8873>), Raphael Scherrer [ctb] (<https://orcid.org/0000-0002-1447-7630>), Yacine B. Chehida [ctb] (<https://orcid.org/0000-0001-7269-9082>), Katharine S. Walter [ctb] (<https://orcid.org/0000-0003-0065-2204>), Gary Napier [ctb] (<https://orcid.org/0000-0002-1077-0055>), Jason Griffiths [ctb] (<https://orcid.org/0000-0002-1667-8233>), Thijs Janzen [ctb] (<https://orcid.org/0000-0002-4162-1140>), Pedro Taucce [ctb] (<https://orcid.org/0000-0002-3088-4543>), Olivier Roy [ctb], Jana Riederer [ctb] (<https://orcid.org/0000-0001-6951-9984>) |
| Maintainer | Richèl J.C. Bilderbeek <richel@richelbilderbeek.nl> |
| License | GPL-3 |
| Version | 2.6.11 |
| URL | https://docs.ropensci.org/beautier/ https://github.com/ropensci/beautier |
| Package repository | View on CRAN |
| Installation |
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