check_file_and_model_agree: Checks if the input FASTA file and the inference model agree.

In beautier: 'BEAUti' from R

Checks if the input FASTA file and the inference model agree.

Description

Will stop if not

Usage

check_file_and_model_agree(input_filename, inference_model)

Arguments

input_filename	A FASTA filename. Use get_fasta_filename to obtain a testing FASTA filename.
inference_model	a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model.

Value

nothing, will stop if needed

beautier documentation built on Nov. 2, 2023, 5:08 p.m.