betalink: Beta-Diversity of Species Interactions

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Measures of beta-diversity in networks, and easy visualization of why two networks are different.

Author
Timothee Poisot <tim@poisotlab.io>
Date of publication
2016-03-26 22:02:17
Maintainer
Timothee Poisot <tim@poisotlab.io>
License
BSD_2_clause + file LICENSE
Version
2.2.1
URLs

View on CRAN

Man pages

anemonefish
Anemone/fish interaction data
B01
Whittaker
B02
Harrison
B03
Cody
B04
WeiherBoylen
B05
Routledge
B06
WilsonShmida
B07
Routledge2
B08
WilsonShmida2
B09
MourelleEzcurra
B10
Jaccard
B11
Sorensen
B12
Magurran
B13
Harrison2
B14
Cody2
B15
ColwellCoddington
B16
Gaston
B17
Williams
B18
Lande
B19
Williams2
B20
HarteKinzig
B21
Ruggiero
B22
Lennon
B23
Lennon2
B24
B24
betalink
beta-diversity of two networks
beta_os_prime
Measure the distance between a network and its metaweb
betapart
Partition sets A and B
df_from_A
data.frame from adjancency matrix
metaweb
Returns a metaweb given a list of networks
name_networks
Give names to networks
network_betadiversity
Components of beta-diversity for a list of networks
network_betaplot
Plot a network with species and interactions highlighted
prepare_networks
Prepare networks

Files in this package

betalink
betalink/NAMESPACE
betalink/NEWS
betalink/data
betalink/data/anemonefish.rdata
betalink/R
betalink/R/network_betaplot.R
betalink/R/prepare_networks.R
betalink/R/beta_os_prime.R
betalink/R/measures.r
betalink/R/network_betadiversity.R
betalink/R/betalink.r
betalink/R/metaweb.r
betalink/README.md
betalink/MD5
betalink/DESCRIPTION
betalink/man
betalink/man/name_networks.Rd
betalink/man/B23.Rd
betalink/man/B07.Rd
betalink/man/B16.Rd
betalink/man/B24.Rd
betalink/man/B11.Rd
betalink/man/B03.Rd
betalink/man/B22.Rd
betalink/man/beta_os_prime.Rd
betalink/man/B13.Rd
betalink/man/B19.Rd
betalink/man/prepare_networks.Rd
betalink/man/B20.Rd
betalink/man/B14.Rd
betalink/man/B10.Rd
betalink/man/B15.Rd
betalink/man/network_betaplot.Rd
betalink/man/B17.Rd
betalink/man/metaweb.Rd
betalink/man/df_from_A.Rd
betalink/man/betalink.Rd
betalink/man/B09.Rd
betalink/man/B12.Rd
betalink/man/B05.Rd
betalink/man/anemonefish.Rd
betalink/man/betapart.Rd
betalink/man/B21.Rd
betalink/man/B06.Rd
betalink/man/network_betadiversity.Rd
betalink/man/B04.Rd
betalink/man/B08.Rd
betalink/man/B01.Rd
betalink/man/B02.Rd
betalink/man/B18.Rd
betalink/LICENSE