Man pages for bigMap
Big Data Mapping
| bdm.boxp | Clustering statistics box-plot. |
| bdm.cost | ptSNE cost & size plot. |
| bdm.dMap | Class density maps |
| bdm.dMap.plot | Class density maps plot. |
| bdm.example | Example dataset |
| bdm.fName | Default bdm file name |
| bdm.init | Create bdm instance |
| bdm.labels | Get data-point clustering labels. |
| bdm.local | Set/get default local machine name or IP address |
| bdm.merge.s2nr | Merging of clusters based on signal-to-noise-ratio. |
| bdm.mybdm | Set/get default path for mybdm |
| bdm.optk.plot | Plots the signal-to-nois-ratio as a function of the number of... |
| bdm.optk.s2nr | Find optimal number of clusters based on... |
| bdm.pakde | Perplexity-adaptive kernel density estimation |
| bdm.pakde.plot | Plot paKDE (density landscape) |
| bdm.ptsne | Parallelized t-SNE |
| bdm.ptsne.plot | Plot ptSNE (low-dimensional embedding) |
| bdm.qMap | ptSNE quantile-maps |
| bdm.save | Save bdm instance |
| bdm.scp | Transfer bdm instance to a remote machine. |
| bdm.wtt | Watertrack transform (WTT) |
| bdm.wtt.plot | Plot WTT (clustering) |
