Files in biodosetools
An R Shiny Application for Biological Dosimetry

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/utils_estimation.R R/mod_fitting_dicent_ui.R R/utils-md.R R/mod_estimation_trans_ui.R R/utils-pipe.R R/mod_help_server.R R/mod_estimation_micro_ui.R R/calcs_aberrations.R R/mod_trans_server.R R/mod_fitting_trans_ui.R R/data.R R/biodosetools-package.R R/app_server.R R/app_config.R R/mod_fitting_micro_ui.R R/mod_estimation_dicent_ui.R R/widgets.R R/utils_fitting.R R/mod_fitting_server.R R/calcs_estimation.R R/calcs_translocations.R R/golem_utils_ui.R R/app_ui.R R/mod_estimation_server.R R/calcs_fitting.R R/utils.R R/run_app.R
inst/golem-config.yml
inst/CITATION
inst/doc/dicent-estimation.R inst/doc/dicent-fitting.Rmd
inst/doc/dicent-fitting.html
inst/doc/trans-estimation.Rmd inst/doc/trans-fitting.Rmd
inst/doc/trans-fitting.html
inst/doc/dicent-estimation.Rmd inst/doc/trans-estimation.R inst/doc/trans-fitting.R inst/doc/dicent-fitting.R
inst/doc/dicent-estimation.html
inst/doc/trans-estimation.html
inst/app/www/biodosetools_style.css
inst/app/www/contributors_app.md
inst/app/www/home.svg
inst/app/www/about_body.md
inst/app/www/favicon.png
inst/app/www/favicon-highres.png
inst/app/www/icon_small.svg
inst/app/www/sass/main.scss
inst/app/www/sass/compile_sass.R
inst/app/www/sass/modules/checkboxes.scss
inst/app/www/sass/modules/fonts.scss
inst/app/www/sass/modules/misc.scss
inst/app/www/sass/modules/buttons.scss
inst/app/www/sass/modules/sidebar.scss
inst/app/www/sass/modules/fixes.scss
inst/app/www/sass/modules/boxes.scss
inst/app/www/sass/modules/fontawesome.scss
inst/app/www/sass/modules/radiobuttons.scss
inst/app/www/sass/modules/config.scss
inst/app/www/sass/modules/modals.scss
inst/app/www/sass/modules/navbar.scss
inst/app/www/sass/modules/switches.scss
inst/app/www/sass/modules/custom.scss
inst/app/reports/fitting-report-pdf.Rmd inst/app/reports/logo.pdf inst/app/reports/fitting-report-docx.Rmd inst/app/reports/estimation-report-docx.Rmd inst/app/reports/estimation-report-pdf.Rmd inst/app/help/fitting/fitting_options_model.md inst/app/help/fitting/fitting_options_formula.md inst/app/help/fitting/count_data_aggregated.md inst/app/help/fitting/count_data_load.md inst/app/help/fitting/count_data_input.md inst/app/help/trans/cases_data_confounders.md inst/app/help/trans/cases_data_input.md inst/app/help/trans/colors_data_input_b.md inst/app/help/trans/cases_data_load.md inst/app/help/trans/fit_data_estimation.md inst/app/help/trans/colors_data_input.md inst/app/help/trans/dose_error_methods.md inst/app/help/save/estimation_data_save_report.md inst/app/help/save/fit_data_save.md inst/app/help/save/fit_data_save_report.md inst/app/help/dicent/dose_error_methods.md inst/app/help/micro/fitting_options_model.md inst/app/help/micro/dose_error_methods.md inst/app/help/estimation/cases_data_input.md inst/app/help/estimation/fit_data_load.md inst/app/help/estimation/dose_mixed_yields.md inst/app/help/estimation/dose_error.md inst/app/help/estimation/dose_assessment.md inst/app/help/estimation/fit_data_input.md inst/app/help/estimation/cases_data_load.md inst/app/help/estimation/fraction_coeff_select.md inst/app/help/estimation/dose_exposure.md
inst/extdata/translocations-fitting-results.rds
inst/extdata/count-data-barquinero-1995.csv
inst/extdata/count-data-rodriguez-2004-aggr.csv
inst/extdata/cases-data-hetero.csv
inst/extdata/dicentrics-fitting-results.rds
inst/extdata/count-data-barquinero-1995-aggr.csv
inst/extdata/cases-data-partial.csv
inst/extdata/count-data-rodriguez-2004.csv
build/vignette.rds
build/partial.rdb
tests/testthat.R tests/testthat/test-mod_help_server.R tests/testthat/test-translocations.R tests/testthat/test-utils.R tests/testthat/test-golem-recommended.R tests/testthat/test-init-tables.R tests/testthat/test-golem_utils_ui.R tests/testthat/test-mod_fitting_server.R tests/testthat/test-mod_estimation_server.R tests/testthat/test-dicentrics.R vignettes/dicent-fitting.Rmd vignettes/trans-estimation.Rmd vignettes/trans-fitting.Rmd vignettes/dicent-estimation.Rmd
vignettes/figures/screenshot-translocations-fit-04.png
vignettes/figures/screenshot-dicentrics-estimate-01b.png
vignettes/figures/screenshot-dicentrics-estimate-01.png
vignettes/figures/screenshot-dicentrics-estimate-03.png
vignettes/figures/screenshot-translocations-estimate-03.png
vignettes/figures/screenshot-dicentrics-estimate-04.png
vignettes/figures/screenshot-translocations-fit-03.png
vignettes/figures/screenshot-dicentrics-estimate-02.png
vignettes/figures/screenshot-translocations-estimate-01b.png
vignettes/figures/screenshot-translocations-estimate-04.png
vignettes/figures/screenshot-translocations-estimate-05.png
vignettes/figures/screenshot-dicentrics-fit-01.png
vignettes/figures/screenshot-translocations-fit-02.png
vignettes/figures/screenshot-translocations-estimate-02.png
vignettes/figures/screenshot-translocations-estimate-01.png
vignettes/figures/screenshot-dicentrics-fit-04.png
vignettes/figures/screenshot-dicentrics-fit-02.png
vignettes/figures/screenshot-translocations-fit-01.png
vignettes/figures/screenshot-dicentrics-fit-03.png
data/dna_content_fractions_ihgsc.rda
data/dna_content_fractions_morton.rda
man/load_rmd_report.Rd man/protracted_g_function.Rd man/calculate_yield_infimum.Rd man/include_help.Rd man/estimate_whole_body_delta.Rd man/estimate_partial_body_dolphin.Rd man/fit.Rd man/estimate_hetero_mixed_poisson.Rd man/run_app.Rd man/correct_negative_vals.Rd man/calculate_trans_rate_sigurdson.Rd man/dna_content_fractions_ihgsc.Rd man/estimate_whole_body_merkle.Rd man/plot_fit_dose_curve.Rd man/fit_glm_method.Rd man/yield_fun.Rd man/R_factor.Rd man/correct_conf_int.Rd man/correct_boundary.Rd man/fit_maxlik_method.Rd man/biodosetools.Rd man/get_deltamethod_std_err.Rd man/calculate_yield.Rd man/AIC_from_data.Rd man/yield_error_fun.Rd man/pipe.Rd man/calculate_model_stats.Rd man/prepare_maxlik_count_data.Rd man/calculate_trans_rate_manual.Rd man/plot_estimated_dose_curve.Rd man/calculate_aberr.Rd man/project_yield.Rd man/dna_content_fractions_morton.Rd man/correct_yield.Rd man/calculate_genome_factor.Rd man/calculate_aberr_table.Rd
man/figures/logo.png
biodosetools documentation built on Nov. 16, 2022, 5:13 p.m.