Man pages for bivarhr
Bivariate Hurdle Regression with Bayesian Model Averaging

add_qsigAdd BH-adjusted q-values and significance stars
add_sheetAdd a worksheet to an Excel workbook with flexible content
bivarhr-packagebivarhr: Bivariate Hurdle Regression
build_designBuild Design Matrices for Bivariate Hurdle Model
contrafactual_ATEContrafactual Average Treatment Effects (ATE) for the...
disc_tercilesDiscretize Numeric Vector into Terciles
dot-as_num1Coerce to numeric and return first element
dot-build_model_with_floorBuild CmdStan model with custom FLOOR constant
dot-first_pvalueExtract a p-value from nested test objects
dot-get_coefSafely extract coefficient matrix from an object
dot-get_pvalExtract p-value from RTransferEntropy result
dot-get_statExtract TE statistic from RTransferEntropy result
dot-is_binary_likeCheck if Vector is Binary-like
dot-read_te_allRead transfer entropy results from CSV files
dot-scalar1Coerce to numeric scalar safely
dot-scalar1_chrCoerce to character scalar safely
dot-write_sheetSafely write a data frame to an Excel worksheet
export_resultsExport Analysis Results
export_results_xlsxExport Results to an Excel Workbook
fit_oneFit Single Bivariate Hurdle Model
get_hurdle_modelGet Default Hurdle Model
load_saved_resultsLoad Saved Results from Directory
make_lagsCreate Lag Matrix
normalize_namesNormalize character names by stripping BOM and NBSP
placebo_temporalTemporal Placebo Test via Time-Index Permutations
predict_multistepMulti-step Predictive Simulation for the Bivariate Hurdle...
prewhiten_bin_glmPre-whiten binary series with logistic GLM
prewhiten_count_glmPre-whiten count series with GLM / NegBin model
prewhiten_rate_glmPre-whiten rate series with log-link Gaussian GLM
print.bivarhr_hmmPrint method for bivarhr_hmm objects
print_floor_smoketestPrint summary of FLOOR smoke test (ELPD ranking invariance)
rc_autoRead CSV with automatic delimiter detection
read_bma_allRead and consolidate BMA weight tables
rolling_oosRolling Out-of-Sample Forecast Evaluation
run_dbnFit a Two-Slice Dynamic Bayesian Network (DBN) for I, C, and...
run_ebaExtreme-Bounds Analysis (EBA) over Control-Variable...
run_hmmHidden Markov Model (HMM) for Path Dependence (Counts I and...
run_sensemakrSensitivity Analysis to Unobserved Confounding (sensemakr)
run_synth_bstsSynthetic Control via BSTS (CausalImpact)
run_transfer_entropyTransfer Entropy for Counts, Rates, and Binary Series
run_varxFit VARX model with diagnostics for I and C
select_by_bmaSelect Best Model via Bayesian Model Averaging
smoketest_floor_elpd_invarianceSmoke Test for FLOOR ELPD Invariance
standardize_continuousStandardize Continuous Columns
standardize_continuous_in_placeStandardize Continuous Columns In Place
summarise_hurdle_top3_posthocSummarise top-3 Hurdle-NB models across control combos
summarise_placebo_top3_posthocSummarise top-3 temporal placebo results
summarise_te_top3_by_type_posthocSummarise top-3 transfer entropy results by type
summarise_te_top3_posthocSummarise top-3 transfer entropy results (global)
summarise_tvarstar_posthocSummarise nonlinear time-series models (TVAR and LSTAR)
summarise_varx_posthocSummarise VARX model fit and diagnostics
bivarhr documentation built on July 7, 2026, 1:06 a.m.