bnspatial: Spatial Implementation of Bayesian Networks and Mapping

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Package for the spatial implementation of Bayesian Networks and mapping in geographical space. It makes maps of expected value (or most likely state) given known and unknown conditions, maps of uncertainty measured as coefficient of variation or Shannon index (entropy), maps of probability associated to any states of any node of the network. Some additional features are provided as well: parallel processing options, data discretization routines and function wrappers designed for users with minimal knowledge of the R language. Outputs can be exported to any common GIS format. Development was funded by the European Union FP7 (2007-2013), under project ROBIN (agreement 283093).

Author
Dario Masante [aut, cre]
Date of publication
2016-07-27 12:01:36
Maintainer
Dario Masante <dmasan@ceh.ac.uk>
License
GPL-3
Version
1.0
URLs

View on CRAN

Man pages

aoi
Build area of interest (A.O.I.)
bnspatial
Spatialize the Bayesian network
ConwyData
Land use change data
ConwyLU
Current land use map (heavily aggregated)
ConwySlope
Slope raster for Conwy catchment.
ConwyStatus
Ownership/legal status raster for Conwy catchment (dummy...
dataDiscretize
Discretize data
evidence
Evidence from extracted spatial inputs.
extractByMask
Extract raster values by mask
LandUseChange
Bayesian network
linkNode
Link nodes to spatial data
loadNetwork
Load a Bayesian network
LUclasses
Lookup list, linking input spatial data and the Bayesian...
mapTarget
Make maps for target node
queryNet
Query the Bayesian network
setClasses
Set classes or intervals

Files in this package

bnspatial
bnspatial/inst
bnspatial/inst/COPYRIGHTS
bnspatial/inst/extdata
bnspatial/inst/extdata/LandUseChange.net
bnspatial/inst/extdata/LUclasses.txt
bnspatial/inst/extdata/ConwyStatus.tif
bnspatial/inst/extdata/ConwySlope.tif
bnspatial/inst/extdata/ConwyLU.tif
bnspatial/inst/doc
bnspatial/inst/doc/bnspatial.html
bnspatial/inst/doc/bnspatial.R
bnspatial/inst/doc/bnspatial.Rmd
bnspatial/NAMESPACE
bnspatial/NEWS.md
bnspatial/data
bnspatial/data/ConwyData.RData
bnspatial/R
bnspatial/R/aoi.R
bnspatial/R/bnspatial.R
bnspatial/R/queryNet.R
bnspatial/R/extractByMask.R
bnspatial/R/loadNetwork.R
bnspatial/R/linkNode.R
bnspatial/R/dataDiscretize.R
bnspatial/R/setClasses.R
bnspatial/R/Conwy-data.R
bnspatial/R/mapTarget.R
bnspatial/R/zzz.R
bnspatial/vignettes
bnspatial/vignettes/fig
bnspatial/vignettes/fig/landuseModel.PNG
bnspatial/vignettes/bnspatial.Rmd
bnspatial/MD5
bnspatial/build
bnspatial/build/vignette.rds
bnspatial/DESCRIPTION
bnspatial/man
bnspatial/man/ConwyData.Rd
bnspatial/man/ConwyStatus.Rd
bnspatial/man/dataDiscretize.Rd
bnspatial/man/setClasses.Rd
bnspatial/man/ConwySlope.Rd
bnspatial/man/ConwyLU.Rd
bnspatial/man/extractByMask.Rd
bnspatial/man/evidence.Rd
bnspatial/man/bnspatial.Rd
bnspatial/man/mapTarget.Rd
bnspatial/man/LUclasses.Rd
bnspatial/man/loadNetwork.Rd
bnspatial/man/aoi.Rd
bnspatial/man/queryNet.Rd
bnspatial/man/LandUseChange.Rd
bnspatial/man/linkNode.Rd