bodenmiller: Profilling of Peripheral Blood Mononuclear Cells using CyTOF
Version 0.1

This data package contains a subset of the Bodenmiller et al, Nat Biotech 2012 dataset for testing single cell, high dimensional analysis and visualization methods.

AuthorYann Abraham [aut, cre], Bernd Bodenmiller [aut]
Date of publication2015-12-18 22:45:47
MaintainerYann Abraham <yann.abraham@gmail.com>
LicenseCC0
Version0.1
URL https://github.com/yannabraham/bodenmiller
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("bodenmiller")

Getting started

README.md
High Dimensional Single Cell Data Exploration"

Popular man pages

refAnnots: Reference Annotation
refFuncMat: Reference Matrix (Functional)
refPhenoMat: Reference Matrix (Phenotypic)
untreatedAnnots: Untreated Samples with 4 Different Treatments (Annotation)
untreatedFuncMat: Untreated Samples with 4 Different Treatments (Functional)
untreatedPhenoMat: Untreated Samples with 4 Different Treatments (Phenotypic)
See all...

All man pages Function index File listing

Man pages

refAnnots: Reference Annotation
refFuncMat: Reference Matrix (Functional)
refPhenoMat: Reference Matrix (Phenotypic)
untreatedAnnots: Untreated Samples with 4 Different Treatments (Annotation)
untreatedFuncMat: Untreated Samples with 4 Different Treatments (Functional)
untreatedPhenoMat: Untreated Samples with 4 Different Treatments (Phenotypic)

Functions

refAnnots Man page
refFuncMat Man page
refPhenoMat Man page
untreatedAnnots Man page
untreatedFuncMat Man page
untreatedPhenoMat Man page

Files

inst
inst/doc
inst/doc/bodenmiller.html
inst/doc/bodenmiller.Rmd
inst/doc/bodenmiller.R
NAMESPACE
data
data/untreatedFuncMat.rda
data/refAnnots.rda
data/refFuncMat.rda
data/datalist
data/refPhenoMat.rda
data/untreatedAnnots.rda
data/untreatedPhenoMat.rda
R
R/untreated.R
R/reference.R
vignettes
vignettes/bodenmiller.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/untreatedAnnots.Rd
man/untreatedPhenoMat.Rd
man/refFuncMat.Rd
man/refPhenoMat.Rd
man/refAnnots.Rd
man/untreatedFuncMat.Rd
bodenmiller documentation built on May 20, 2017, 2:14 a.m.

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