A programmatic interface to the Web Service methods provided by Bold Systems for genetic 'barcode' data. Functions include methods for searching by sequences by taxonomic names, ids, collectors, and institutions; as well as a function for searching for specimens, and downloading trace files.
|Author||Scott Chamberlain [aut, cre]|
|Date of publication||2017-01-06 23:15:12|
|Maintainer||Scott Chamberlain <firstname.lastname@example.org>|
|License||MIT + file LICENSE|
bold_filter: Get BOLD specimen + sequence data.
bold_identify: Search for matches to sequences against the BOLD COI...
bold_identify_parents: Add taxonomic parent names to a data.frame
bold-package: bold: A programmatic interface to the Barcode of Life data.
bold_seq: Search BOLD for sequences.
bold_seqspec: Get BOLD specimen + sequence data.
bold_specimens: Search BOLD for specimens.
bold_tax_id: Search BOLD for taxonomy data by BOLD ID.
bold_tax_name: Search BOLD for taxonomy data by taxonomic name.
bold_trace: Get BOLD trace files
sequences: List of 3 nucleotide sequences to use in examples for the...