Applicable to any classification problem with more than 2 classes. It relies on bootstrap subsamplings of sPLS-DA and provides tools to select the most stable variables (defined as the ones consistently selected over the bootstrap subsamplings) and to predict the class of test samples.

Author | Florian Rohart [aut, cre], Kim-Anh Le Cao [boss], Christine Wells [boss] |

Date of publication | 2015-08-20 10:39:44 |

Maintainer | Florian Rohart <florian.rohart@gmail.com> |

License | GPL-3 |

Version | 1.0.3 |

**bootsPLS:** Performs replications of the splsda on random subsamplings of...

**bootsPLS-package:** bootsPLS: bootstrap subsamplings of sPLS-DA for...

**CI.prediction:** Compute Confidence Intervals (CI) for test samples

**compile.bootsPLS.object:** Combine several bootsPLS objects into one

**component.selection:** Tune the number of components

**fit.model:** Create a spls.constraint object by fitting a constraint spls...

**MSC:** Mesenchymal Stem Cells data

**plot.bootsPLS:** Plot the frequency of selection of all variables for all the...

**plot.component.selection:** Plot the results of the testing procedure to determine the...

**plot.variable.selection:** Plot the results of the testing procedure to determine the...

**prediction:** prediction

**spls.hybrid:** spls.hybrid, midway between PLS and sPLS

**variable.selection:** Tune the number of variables on each component

bootsPLS

bootsPLS/NAMESPACE

bootsPLS/NEWS

bootsPLS/data

bootsPLS/data/MSC.rda

bootsPLS/R

bootsPLS/R/routine.R
bootsPLS/R/bootsPLS.R
bootsPLS/R/CI.prediction.R
bootsPLS/R/plot.bootsPLS.R
bootsPLS/R/helpers.R
bootsPLS/R/fit.model.R
bootsPLS/R/plot.selection.comp.variable.R
bootsPLS/R/grey_area.R
bootsPLS/R/selection.R
bootsPLS/R/spls.hybrid.R
bootsPLS/R/prediction.R
bootsPLS/R/CV.spls.constraint.R
bootsPLS/R/compile.bootsPLS.object.R
bootsPLS/MD5

bootsPLS/DESCRIPTION

bootsPLS/man

bootsPLS/man/plot.variable.selection.Rd
bootsPLS/man/bootsPLS.Rd
bootsPLS/man/prediction.Rd
bootsPLS/man/plot.bootsPLS.Rd
bootsPLS/man/bootsPLS-package.Rd
bootsPLS/man/component.selection.Rd
bootsPLS/man/fit.model.Rd
bootsPLS/man/compile.bootsPLS.object.Rd
bootsPLS/man/MSC.Rd
bootsPLS/man/spls.hybrid.Rd
bootsPLS/man/variable.selection.Rd
bootsPLS/man/CI.prediction.Rd
bootsPLS/man/plot.component.selection.Rd
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