myGene: clinical dataset
In bossR: Biomarker Optimal Segmentation System
myGene R Documentation
clinical dataset
Description
This data set gives the expression levels of gene data, overall survival time, and censoring
status from 500 lung adenocarcinoma cases.
Usage
myGene
Format
A dataframe containing 500 observations of 3 variables.
Source
raw survival data come from https://tau.cmmt.ubc.ca/cSurvival/project_data/TCGA-LUAD/df_survival_o.csv and raw gene expression data come from https://tau.cmmt.ubc.ca/cSurvival/project_data/TCGA-LUAD/df_gene.csv
References
Xuanjin Cheng, Yongxing Liu, Jiahe Wang, Yujie Chen, Andrew Gordon Robertson, Xuekui Zhang, Steven J M
Jones, and Stefan Taubert. (2022) cSurvival: a web resource for biomarker interactions in cancer outcomes and in cell lines. Briefings in Bioinformatics.
bossR documentation built on May 29, 2024, 6:23 a.m.
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| myGene | R Documentation |
clinical dataset
Description
This data set gives the expression levels of gene data, overall survival time, and censoring status from 500 lung adenocarcinoma cases.
Usage
myGeneFormat
A dataframe containing 500 observations of 3 variables.
Source
raw survival data come from https://tau.cmmt.ubc.ca/cSurvival/project_data/TCGA-LUAD/df_survival_o.csv and raw gene expression data come from https://tau.cmmt.ubc.ca/cSurvival/project_data/TCGA-LUAD/df_gene.csv
References
Xuanjin Cheng, Yongxing Liu, Jiahe Wang, Yujie Chen, Andrew Gordon Robertson, Xuekui Zhang, Steven J M Jones, and Stefan Taubert. (2022) cSurvival: a web resource for biomarker interactions in cancer outcomes and in cell lines. Briefings in Bioinformatics.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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