Description Usage Arguments Details Value Note Author(s) See Also Examples
Perform canoncial correlation analysis via projection pursuit based on alternating series of grid searches in twodimensional subspaces of each data set, with a focus on robust and nonparametric methods.
1 2 3 4 5 6 7 8 9  ccaGrid(x, y, k = 1, method = c("spearman", "kendall", "quadrant", "M",
"pearson"), control = list(...), nIterations = 10, nAlternate = 10,
nGrid = 25, select = NULL, tol = 1e06, standardize = TRUE,
fallback = FALSE, seed = NULL, ...)
CCAgrid(x, y, k = 1, method = c("spearman", "kendall", "quadrant", "M",
"pearson"), maxiter = 10, maxalter = 10, splitcircle = 25,
select = NULL, zero.tol = 1e06, standardize = TRUE,
fallback = FALSE, seed = NULL, ...)

x, y 
each can be a numeric vector, matrix or data frame. 
k 
an integer giving the number of canonical variables to compute. 
method 
a character string specifying the correlation functional to
maximize. Possible values are 
control 
a list of additional arguments to be passed to the specified
correlation functional. If supplied, this takes precedence over additional
arguments supplied via the 
nIterations, maxiter 
an integer giving the maximum number of iterations. 
nAlternate, maxalter 
an integer giving the maximum number of alternate series of grid searches in each iteration. 
nGrid, splitcircle 
an integer giving the number of equally spaced grid points on the unit circle to use in each grid search. 
select 
optional; either an integer vector of length two or a list
containing two index vectors. In the first case, the first integer gives
the number of variables of 
tol, zero.tol 
a small positive numeric value to be used for determining convergence. 
standardize 
a logical indicating whether the data should be (robustly) standardized. 
fallback 
logical indicating whether a fallback mode for robust standardization should be used. If a correlation functional other than the Pearson correlation is maximized, the first attempt for standardizing the data is via median and MAD. In the fallback mode, variables whose MADs are zero (e.g., dummy variables) are standardized via mean and standard deviation. Note that if the Pearson correlation is maximized, standardization is always done via mean and standard deviation. 
seed 
optional initial seed for the random number generator (see

... 
additional arguments to be passed to the specified correlation functional. Currently, this is only relevant for the Mestimator. For Spearman, Kendall and quadrant correlation, consistency at the normal model is always forced. 
The algorithm is based on alternating series of grid searches in
twodimensional subspaces of each data set. In each grid search,
nGrid
grid points on the unit circle in the corresponding plane are
obtained, and the directions from the center to each of the grid points are
examined. In the first iteration, equispaced grid points in the interval
[pi/2, pi/2) are used. In each subsequent
iteration, the angles are halved such that the interval
[pi/4, pi/4) is used in the second iteration and so
on. If only one data set is multivariate, the algorithm simplifies
to iterative grid searches in twodimensional subspaces of the corresponding
data set.
In the basic algorithm, the order of the variables in a series of grid
searches for each of the data sets is determined by the average absolute
correlations with the variables of the respective other data set. Since
this requires to compute the full (p x q) matrix of
absolute correlations, where p denotes the number of variables of
x
and q the number of variables of y
, a faster
modification is available as well. In this modification, the average
absolute correlations are computed over only a subset of the variables of
the respective other data set. It is thereby possible to use randomly
selected subsets of variables, or to specify the subsets of variables
directly.
Note that also the data sets are ordered according to the maximum average absolute correlation with the respective other data set to ensure symmetry of the algorithm.
For higher order canonical correlations, the data are first transformed into suitable subspaces. Then the alternate grid algorithm is applied to the reduced data and the results are backtransformed to the original space.
An object of class "cca"
with the following components:
cor 
a numeric vector giving the canonical correlation measures. 
A 
a numeric matrix in which the columns contain the canonical vectors
for 
B 
a numeric matrix in which the columns contain the canonical vectors
for 
centerX 
a numeric vector giving the center estimates used in
standardization of 
centerY 
a numeric vector giving the center estimates used in
standardization of 
scaleX 
a numeric vector giving the scale estimates used in
standardization of 
scaleY 
a numeric vector giving the scale estimates used in
standardization of 
call 
the matched function call. 
CCAgrid
is a simple wrapper function for ccaGrid
for
more compatibility with package pcaPP concerning function and argument
names.
Andreas Alfons
ccaProj
, maxCorGrid
,
corFunctions
1 2 3 4 5 6 7 8 9 
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