cgh: Microarray CGH analysis using the Smith-Waterman algorithm

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Functions to analyze microarray comparative genome hybridization data using the Smith-Waterman algorithm

Author
Tom Price <t0mpr1c3@gmail.com>
Date of publication
2010-05-07 16:10:28
Maintainer
Tom Price <t0mpr1c3@gmail.com>
License
GPL (>= 2)
Version
1.0-7.1
URLs

View on CRAN

Man pages

sw
Perform the Smith-Waterman Algorithm
sw.perm.test
Permutation Test for Smith-Waterman Algorithm
sw.plot
Plot Results of Smith-Waterman Algorithm
sw.rob
Robustness Calculation for Smith-Waterman Algorithm
sw.threshold
Threshold function

Files in this package

cgh
cgh/CHANGES
cgh/DESCRIPTION
cgh/man
cgh/man/sw.perm.test.Rd
cgh/man/sw.plot.Rd
cgh/man/sw.Rd
cgh/man/sw.rob.Rd
cgh/man/sw.threshold.Rd
cgh/NAMESPACE
cgh/R
cgh/R/cgh.R
cgh/src
cgh/src/sw.c