tests/testthat/_snaps/aet04.md

aet04 can handle NA values

Code
  cat(export_as_txt(res1, lpp = 100))
Output
    MedDRA System Organ Class                                                           
      MedDRA Preferred Term                     A: Drug X    B: Placebo   C: Combination
                                Grade             (N=15)       (N=15)         (N=15)    
    ————————————————————————————————————————————————————————————————————————————————————
    - Any adverse events -                                                              
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-4       4 (26.7%)    4 (26.7%)      3 (20.0%)   
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                Grade 5         8 (53.3%)    8 (53.3%)      10 (66.7%)  
    No Coding Available                                                                 
      - Overall -                                                                       
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-4       4 (26.7%)    4 (26.7%)      3 (20.0%)   
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                Grade 5         8 (53.3%)    8 (53.3%)      10 (66.7%)  
      No Coding Available                                                               
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-4       4 (26.7%)    4 (26.7%)      3 (20.0%)   
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                Grade 5         8 (53.3%)    8 (53.3%)      10 (66.7%)
Code
  cat(export_as_txt(res3, lpp = 100))
Output
    MedDRA System Organ Class                                                           
      MedDRA Preferred Term                     A: Drug X    B: Placebo   C: Combination
                                Grade             (N=15)       (N=15)         (N=15)    
    ————————————————————————————————————————————————————————————————————————————————————
    - Any adverse events -                                                              
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-5       12 (80.0%)   12 (80.0%)     13 (86.7%)  
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                5               8 (53.3%)    8 (53.3%)      10 (66.7%)  
    No Coding Available                                                                 
      - Overall -                                                                       
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-5       12 (80.0%)   12 (80.0%)     13 (86.7%)  
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                5               8 (53.3%)    8 (53.3%)      10 (66.7%)  
      No Coding Available                                                               
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-5       12 (80.0%)   12 (80.0%)     13 (86.7%)  
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                5               8 (53.3%)    8 (53.3%)      10 (66.7%)

aet04 can handle some NA values

Code
  cat(export_as_txt(res1, lpp = 100))
Output
    MedDRA System Organ Class                                                           
      MedDRA Preferred Term                     A: Drug X    B: Placebo   C: Combination
                                Grade             (N=15)       (N=15)         (N=15)    
    ————————————————————————————————————————————————————————————————————————————————————
    - Any adverse events -                                                              
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-4       4 (26.7%)    4 (26.7%)      3 (20.0%)   
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                Grade 5         8 (53.3%)    8 (53.3%)      10 (66.7%)  
    cl B.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   11 (73.3%)   8 (53.3%)      10 (66.7%)  
                                Grade 1-2       6 (40.0%)    2 (13.3%)      5 (33.3%)   
                                1               6 (40.0%)    2 (13.3%)      5 (33.3%)   
                                Grade 3-4       5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                3               5 (33.3%)    6 (40.0%)      5 (33.3%)   
      dcd B.2.2.3.1                                                                     
                                - Any Grade -   8 (53.3%)    6 (40.0%)      7 (46.7%)   
                                Grade 1-2       8 (53.3%)    6 (40.0%)      7 (46.7%)   
                                1               8 (53.3%)    6 (40.0%)      7 (46.7%)   
      dcd B.2.1.2.1                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                Grade 3-4       5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                3               5 (33.3%)    6 (40.0%)      5 (33.3%)   
    cl D.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   8 (53.3%)    5 (33.3%)      11 (73.3%)  
                                Grade 3-4       4 (26.7%)     1 (6.7%)      4 (26.7%)   
                                3               4 (26.7%)     1 (6.7%)      4 (26.7%)   
                                Grade 5         4 (26.7%)    4 (26.7%)      7 (46.7%)   
      dcd D.1.1.1.1                                                                     
                                - Any Grade -   4 (26.7%)    4 (26.7%)      7 (46.7%)   
                                Grade 5         4 (26.7%)    4 (26.7%)      7 (46.7%)   
      dcd D.1.1.4.2                                                                     
                                - Any Grade -   5 (33.3%)    2 (13.3%)      7 (46.7%)   
                                Grade 3-4       5 (33.3%)    2 (13.3%)      7 (46.7%)   
                                3               5 (33.3%)    2 (13.3%)      7 (46.7%)   
    cl A.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   7 (46.7%)    6 (40.0%)      10 (66.7%)  
                                Grade 1-2       7 (46.7%)    6 (40.0%)      10 (66.7%)  
                                1               2 (13.3%)        0          4 (26.7%)   
                                2               5 (33.3%)    6 (40.0%)      6 (40.0%)   
      dcd A.1.1.1.2                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      6 (40.0%)   
                                Grade 1-2       5 (33.3%)    6 (40.0%)      6 (40.0%)   
                                2               5 (33.3%)    6 (40.0%)      6 (40.0%)   
      dcd A.1.1.1.1                                                                     
                                - Any Grade -   3 (20.0%)     1 (6.7%)      6 (40.0%)   
                                Grade 1-2       3 (20.0%)     1 (6.7%)      6 (40.0%)   
                                1               3 (20.0%)     1 (6.7%)      6 (40.0%)   
    cl B.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                Grade 5         5 (33.3%)    6 (40.0%)      8 (53.3%)   
      dcd B.1.1.1.1                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                Grade 5         5 (33.3%)    6 (40.0%)      8 (53.3%)   
    cl C.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                Grade 1-2       6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                2               6 (40.0%)    4 (26.7%)      8 (53.3%)   
      dcd C.2.1.2.1                                                                     
                                - Any Grade -   6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                Grade 1-2       6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                2               6 (40.0%)    4 (26.7%)      8 (53.3%)   
    cl D.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                Grade 1-2       2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                1               2 (13.3%)    5 (33.3%)      7 (46.7%)   
      dcd D.2.1.5.3                                                                     
                                - Any Grade -   2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                Grade 1-2       2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                1               2 (13.3%)    5 (33.3%)      7 (46.7%)   
    cl C.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                Grade 3-4       3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                4               3 (20.0%)    4 (26.7%)      5 (33.3%)   
      dcd C.1.1.1.3                                                                     
                                - Any Grade -   3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                Grade 3-4       3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                4               3 (20.0%)    4 (26.7%)      5 (33.3%)   
    No Coding Available                                                                 
      - Overall -                                                                       
                                - Any Grade -    1 (6.7%)        0              0       
                                Grade 3-4        1 (6.7%)        0              0       
                                4                1 (6.7%)        0              0       
      No Coding Available                                                               
                                - Any Grade -    1 (6.7%)        0              0       
                                Grade 3-4        1 (6.7%)        0              0       
                                4                1 (6.7%)        0              0
Code
  cat(export_as_txt(res3, lpp = 100))
Output
    MedDRA System Organ Class                                                           
      MedDRA Preferred Term                     A: Drug X    B: Placebo   C: Combination
                                Grade             (N=15)       (N=15)         (N=15)    
    ————————————————————————————————————————————————————————————————————————————————————
    - Any adverse events -                                                              
                                - Any Grade -   13 (86.7%)   14 (93.3%)     15 (100%)   
                                Grade 1-2        1 (6.7%)    2 (13.3%)      2 (13.3%)   
                                1                   0         1 (6.7%)       1 (6.7%)   
                                2                1 (6.7%)     1 (6.7%)       1 (6.7%)   
                                Grade 3-5       12 (80.0%)   12 (80.0%)     13 (86.7%)  
                                3                1 (6.7%)    2 (13.3%)       1 (6.7%)   
                                4               3 (20.0%)    2 (13.3%)      2 (13.3%)   
                                5               8 (53.3%)    8 (53.3%)      10 (66.7%)  
    cl B.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   11 (73.3%)   8 (53.3%)      10 (66.7%)  
                                Grade 1-2       6 (40.0%)    2 (13.3%)      5 (33.3%)   
                                1               6 (40.0%)    2 (13.3%)      5 (33.3%)   
                                Grade 3-5       5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                3               5 (33.3%)    6 (40.0%)      5 (33.3%)   
      dcd B.2.2.3.1                                                                     
                                - Any Grade -   8 (53.3%)    6 (40.0%)      7 (46.7%)   
                                Grade 1-2       8 (53.3%)    6 (40.0%)      7 (46.7%)   
                                1               8 (53.3%)    6 (40.0%)      7 (46.7%)   
      dcd B.2.1.2.1                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                Grade 3-5       5 (33.3%)    6 (40.0%)      5 (33.3%)   
                                3               5 (33.3%)    6 (40.0%)      5 (33.3%)   
    cl D.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   8 (53.3%)    5 (33.3%)      11 (73.3%)  
                                Grade 3-5       8 (53.3%)    5 (33.3%)      11 (73.3%)  
                                3               4 (26.7%)     1 (6.7%)      4 (26.7%)   
                                5               4 (26.7%)    4 (26.7%)      7 (46.7%)   
      dcd D.1.1.1.1                                                                     
                                - Any Grade -   4 (26.7%)    4 (26.7%)      7 (46.7%)   
                                Grade 3-5       4 (26.7%)    4 (26.7%)      7 (46.7%)   
                                5               4 (26.7%)    4 (26.7%)      7 (46.7%)   
      dcd D.1.1.4.2                                                                     
                                - Any Grade -   5 (33.3%)    2 (13.3%)      7 (46.7%)   
                                Grade 3-5       5 (33.3%)    2 (13.3%)      7 (46.7%)   
                                3               5 (33.3%)    2 (13.3%)      7 (46.7%)   
    cl A.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   7 (46.7%)    6 (40.0%)      10 (66.7%)  
                                Grade 1-2       7 (46.7%)    6 (40.0%)      10 (66.7%)  
                                1               2 (13.3%)        0          4 (26.7%)   
                                2               5 (33.3%)    6 (40.0%)      6 (40.0%)   
      dcd A.1.1.1.2                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      6 (40.0%)   
                                Grade 1-2       5 (33.3%)    6 (40.0%)      6 (40.0%)   
                                2               5 (33.3%)    6 (40.0%)      6 (40.0%)   
      dcd A.1.1.1.1                                                                     
                                - Any Grade -   3 (20.0%)     1 (6.7%)      6 (40.0%)   
                                Grade 1-2       3 (20.0%)     1 (6.7%)      6 (40.0%)   
                                1               3 (20.0%)     1 (6.7%)      6 (40.0%)   
    cl B.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                Grade 3-5       5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                5               5 (33.3%)    6 (40.0%)      8 (53.3%)   
      dcd B.1.1.1.1                                                                     
                                - Any Grade -   5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                Grade 3-5       5 (33.3%)    6 (40.0%)      8 (53.3%)   
                                5               5 (33.3%)    6 (40.0%)      8 (53.3%)   
    cl C.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                Grade 1-2       6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                2               6 (40.0%)    4 (26.7%)      8 (53.3%)   
      dcd C.2.1.2.1                                                                     
                                - Any Grade -   6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                Grade 1-2       6 (40.0%)    4 (26.7%)      8 (53.3%)   
                                2               6 (40.0%)    4 (26.7%)      8 (53.3%)   
    cl D.2                                                                              
      - Overall -                                                                       
                                - Any Grade -   2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                Grade 1-2       2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                1               2 (13.3%)    5 (33.3%)      7 (46.7%)   
      dcd D.2.1.5.3                                                                     
                                - Any Grade -   2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                Grade 1-2       2 (13.3%)    5 (33.3%)      7 (46.7%)   
                                1               2 (13.3%)    5 (33.3%)      7 (46.7%)   
    cl C.1                                                                              
      - Overall -                                                                       
                                - Any Grade -   3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                Grade 3-5       3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                4               3 (20.0%)    4 (26.7%)      5 (33.3%)   
      dcd C.1.1.1.3                                                                     
                                - Any Grade -   3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                Grade 3-5       3 (20.0%)    4 (26.7%)      5 (33.3%)   
                                4               3 (20.0%)    4 (26.7%)      5 (33.3%)   
    No Coding Available                                                                 
      - Overall -                                                                       
                                - Any Grade -    1 (6.7%)        0              0       
                                Grade 3-5        1 (6.7%)        0              0       
                                4                1 (6.7%)        0              0       
  \s\n  MedDRA System Organ Class                                                           
      MedDRA Preferred Term                     A: Drug X    B: Placebo   C: Combination
                                Grade             (N=15)       (N=15)         (N=15)    
    ————————————————————————————————————————————————————————————————————————————————————
    No Coding Available                                                                 
      No Coding Available                                                               
                                - Any Grade -    1 (6.7%)        0              0       
                                Grade 3-5        1 (6.7%)        0              0       
                                4                1 (6.7%)        0              0


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chevron documentation built on June 20, 2025, 5:08 p.m.