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tests/testthat/_snaps/lbt15.md
In chevron: Standard TLGs for Clinical Trials Reporting
lbt15 functions with default argument value return expected result with test data
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle all NA values
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
\s\n
PARCAT1: COAGULATION
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
\s\n
PARCAT1: HEMATOLOGY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
lbt15 can handle missing levels
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 0/7
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 0/6 0/4
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 0/6
\s\n
PARCAT1: HEMATOLOGY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle missing levels in baseline
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/8 (12.5%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/3 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/7
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/6 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/5
High 0/5 0/5 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle some NA values
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle some NA values in baseline
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
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lbt15 functions with default argument value return expected result with test data
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle all NA values
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
\s\n
PARCAT1: COAGULATION
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
\s\n
PARCAT1: HEMATOLOGY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
C-Reactive Protein Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
Immunoglobulin A Measurement
Low 0/0 0/0 0/0
High 0/0 0/0 0/0
lbt15 can handle missing levels
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 0/7
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 0/6 0/4
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 0/6
\s\n
PARCAT1: HEMATOLOGY
————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
ANRIND (N=15) (N=15) (N=15)
————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle missing levels in baseline
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/8 (12.5%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/3 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/7
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/6 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/5
High 0/5 0/5 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle some NA values
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
lbt15 can handle some NA values in baseline
Code
cat(export_as_txt(res, lpp = 100))
Output
PARCAT1: CHEMISTRY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/7 0/3 1/7 (14.3%)
High 0/7 0/3 0/8
C-Reactive Protein Measurement
Low 0/8 0/3 0/7
High 0/8 0/2 0/7
Immunoglobulin A Measurement
Low 0/5 0/8 0/7
High 0/5 0/8 0/6
\s\n
PARCAT1: COAGULATION
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/4 0/7 0/4
High 0/5 0/7 0/4
C-Reactive Protein Measurement
Low 0/5 0/6 0/4
High 0/5 1/6 (16.7%) 1/4 (25.0%)
Immunoglobulin A Measurement
Low 0/8 0/9 0/6
High 0/8 0/9 1/6 (16.7%)
\s\n
PARCAT1: HEMATOLOGY
—————————————————————————————————————————————————————————————————————————————————
Laboratory Test A: Drug X B: Placebo C: Combination
Analysis Toxicity Grade (N=15) (N=15) (N=15)
—————————————————————————————————————————————————————————————————————————————————
Alanine Aminotransferase Measurement
Low 0/5 0/5 0/4
High 0/6 0/5 0/4
C-Reactive Protein Measurement
Low 0/5 0/5 0/4
High 0/5 0/4 0/5
Immunoglobulin A Measurement
Low 0/3 0/4 0/8
High 0/3 0/4 0/8
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