cifmodeling
Visualization and Polytomous Modeling of Survival and Competing Risks

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343
Source code
76
Man pages
32
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cifmodeling: Visualization and Polytomous Modeling of Survival and Competing Risks
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API

API for cifmodeling
Visualization and Polytomous Modeling of Survival and Competing Risks

Global functions
.assert Source code
.assert_choice Source code
.assert_limits Source code
.cifcurve_add_one_sided_p Source code
.cifcurve_adjusted_ci Source code
.cifcurve_check_inference Source code
.cifcurve_ci_validity Source code
.cifcurve_df_coordinate Source code
.cifcurve_df_stratum Source code
.cifcurve_df_system Source code
.cifcurve_extract_at_time Source code
.cifcurve_followup Source code
.cifcurve_legacy Source code
.cifcurve_legacy_aj_se Source code
.cifcurve_match_null_hypothesis Source code
.cifcurve_normalize_conf_type Source code
.cifcurve_normalize_error Source code
.cifcurve_normalize_outcome_type Source code
.cifcurve_one_sided_p Source code
.cifcurve_one_sided_tail_pvalue Source code
.cifcurve_print_one_sided_p Source code
.cifcurve_reporting Source code
.cifcurve_reporting_at Source code
.cifcurve_transform_probability Source code
.err Source code
.flowchart_count_nodes Source code
.flowchart_event_status Source code
.flowchart_exclude Source code
.flowchart_levels Source code
.flowchart_make_dot Source code
.flowchart_prepare_data Source code
.flowchart_reason_lines Source code
.flowchart_relabel Source code
.flowchart_tab Source code
.polyreg_reporting_info Source code
.polyreg_reporting_metadata Source code
.warn Source code
Event Man page Source code
LevenbergMarquardt Source code
`%||%` Source code
`[.cifcurve` Source code
append_trace Source code
apply_strata_to_plots Source code
as_ggplot Man page Source code
as_ggplot.cifplot Source code
as_ggplot.default Source code
as_modelsummary Man page Source code
as_modelsummary.default Source code
as_modelsummary.polyreg Man page Source code
as_prediction_data Man page Source code
as_prediction_data.default Source code
as_prediction_data.polyreg Man page Source code
augment.ciftest Source code
augment.ciftest_mdir Source code
augment.polyreg Man page Source code
binregRatioLOP Source code
build_closed_form_augmentation Man page Source code
build_closed_form_augmentation_multi Source code
build_direct_fixed_point_score_iid Source code
build_fg_score_iid Man page Source code
build_fg_score_iid_event_stratified Source code
build_fg_score_iid_multi Source code
build_iterated_score_iid Man page Source code
build_seed_aipwcc_score_iid Source code
calculateAJ_Rcpp Source code
calculateCI Source code
calculateCov Source code
calculateCovSurvival Source code
calculateDSurvival Source code
calculateEY Source code
calculateEY1 Source code
calculateIPCW Source code
calculateJackKnife Source code
calculateJackKnifeSE Source code
calculateKM Man page Source code
calculateKM_engine Source code
calculateKaplanMeier Source code
calculateNelsonAalen Source code
calculatePotentialCIFs Source code
calculatePotentialRisk Source code
calculatePotentialRiskK_LM Source code
calculatePotentialRisk_LM Source code
calculateRMST Source code
calculate_A12_logrank_weightit Man page Source code
calculate_gray Man page Source code
calculate_ipcw_weights Source code
calculate_log_rank Source code
callLevenbergMarquardt Source code
call_calculateAJ_Rcpp Source code
call_ggsurvfit Source code
call_ggsurvfit_old Source code
censoring_km_score_correction Man page Source code
check_ggsurvfit Source code
check_weights Source code
cif-stat-arguments Man page
cif-visual-arguments Man page
cif_prepare_event Source code
cif_prepare_input Source code
cifcurve Man page Source code
cifflowchart Man page Source code
cifmodeling Man page
cifmodeling-package Man page
cifpanel Man page Source code
cifplot Man page Source code
cifplot_single Source code
cifsimulate Source code
ciftest Man page Source code
ciftest_anchor_aipwcc_iid Source code
ciftest_appendix_e_j_cell Source code
ciftest_appendix_e_l_process Source code
ciftest_appendix_e_map Source code
ciftest_appendix_e_operator Source code
ciftest_augmentation_cell Source code
ciftest_augmentation_cpp_variant Source code
ciftest_augmentation_iid_kernel_cpp Source code
ciftest_augmentation_iid_multi_kernel_cpp Source code
ciftest_augmentation_iid_prefix_kernel_cpp Source code
ciftest_augmentation_iid_prefix_multi_kernel_cpp Source code
ciftest_batch_has_strata Source code
ciftest_batch_internal Source code
ciftest_batch_method_input Source code
ciftest_batch_precompute_multi Source code
ciftest_batch_strata_key Source code
ciftest_batch_strata_value Source code
ciftest_cache_censoring Source code
ciftest_cache_fixed_point_operator Source code
ciftest_cache_key Source code
ciftest_cache_working_aj Source code
ciftest_censoring_event_indicator Source code
ciftest_compare_augmentation_kernels Source code
ciftest_compare_fg_kernels Source code
ciftest_direct_converged Source code
ciftest_fg_cpp_variant Source code
ciftest_fg_iid_kernel_cpp Source code
ciftest_fg_iid_multi_kernel_cpp Source code
ciftest_fg_iid_prefix_kernel_cpp Source code
ciftest_fg_iid_prefix_multi_kernel_cpp Source code
ciftest_fg_risk_weights Source code
ciftest_fit_prepared Source code
ciftest_iterated_aipwcc_iid Source code
ciftest_iteration_setup Man page Source code
ciftest_kernel_status Source code
ciftest_make_strata_info Source code
ciftest_mdir Man page Source code
ciftest_mdir_directions Source code
ciftest_mdir_gray_covariance Source code
ciftest_mdir_gray_stratum_covariance Source code
ciftest_mdir_logrank_covariance Source code
ciftest_normalize_strata_columns Source code
ciftest_null_fh_weight Source code
ciftest_null_fh_weight_at Source code
ciftest_prepare Source code
ciftest_quadratic_form Source code
ciftest_resolve_test_spec Source code
ciftest_reverse_cumsum Source code
ciftest_run_augmentation_cpp_kernel Source code
ciftest_run_fg_cpp_kernel Source code
ciftest_score_fh_process Source code
ciftest_use_cpp_kernel Source code
ciftest_working_cell Source code
clampLogP Source code
clampP Source code
coef.polyreg Man page Source code
cov_wild_bootstrap Source code
createAnalysisDataset Source code
createAtRiskMatrix Source code
createCensoringFormula Source code
createTestData1 Source code
createTestData2 Source code
curve_check_error Source code
diabetes.complications Man page
effect_label.polyreg Man page Source code
estimate_censoring_km Man page Source code
estimate_working_aj Man page Source code
estimating_equation_ipcw Source code
extractOptimizationInfo Source code
extract_time_to_event Man page Source code
fd_step_safe Man page Source code
getCoef Source code
getCoefTerm Source code
getInitialValues Source code
getInitialValuesProportional Source code
getPotentialRisk Source code
get_weightit_mparts Man page Source code
glance.ciftest Source code
glance.ciftest_mdir Source code
glance.polyreg Man page Source code
glance_df Source code
gray_stratum_components Source code
harmonize_engine_output Source code
jacobian_CIFs Source code
jacobian_risk Source code
model_identify_variables.polyreg Source code
model_list_contrasts.polyreg Source code
model_list_terms_levels.polyreg Source code
model_list_variables.polyreg Source code
new_ciftest_nuisance_cache Source code
nobs.ciftest Source code
nobs.polyreg Man page Source code
normalize_strata_info Source code
output_check_dots Source code
output_check_level Source code
output_coefficient_table Source code
output_inference_metadata Source code
output_model_glance Source code
output_model_tidy Source code
output_modelsummary Source code
output_plot_style Source code
panel_as_formula Source code
panel_build_theme Source code
panel_dedupe_named_args Source code
panel_drop_nulls Source code
panel_extract_fonts Source code
panel_force_apply Source code
panel_is_comp Source code
panel_is_surv Source code
panel_modify_list Source code
panel_norm_outcome Source code
panel_normalize_outcome_type Source code
panel_prepare Source code
panel_recycle_to Source code
panel_strip_overrides_from_dots Source code
panel_to_list Source code
panel_update_rows.columns.panel Source code
plot_align_mark_keys Source code
plot_apply_all_scales Source code
plot_apply_style Source code
plot_check_code_events Source code
plot_default_fallback_color Source code
plot_default_y_label Source code
plot_draw_marks Source code
plot_ensure_factor_strata Source code
plot_fix_palette_vector_arg Source code
plot_make_dots_clean Source code
plot_make_label.strata.map Source code
plot_make_mark_data_frame Source code
plot_make_x_max Source code
plot_normalize_formula_data Source code
plot_normalize_strata Source code
plot_normalize_type_y Source code
plot_panel.censoring Source code
plot_panel.per.event Source code
plot_panel.per.variable Source code
plot_reconcile_order_and_labels Source code
plot_reconcile_order_and_labels_old Source code
plot_resolve_palette_color Source code
plot_strip_mapped_scales Source code
plot_style_bold Source code
plot_style_classic Source code
plot_style_framed Source code
plot_style_gray Source code
plot_style_grid Source code
plot_survfit_strata_labels Source code
plot_theme_risktable_font Source code
plot_validate_fix_color Source code
polyreg Man page Source code
polyreg-methods Man page
polyreg_score_sensitivity Source code
predict_censoring_km Man page Source code
predict_working_aj Man page Source code
print.cifpanel Source code
print.cifplot Source code
print.ciftest Source code
print.ciftest_mdir Source code
print.summary.polyreg Man page Source code
prostate Man page
reg_check_effect.measure Source code
reg_check_input Source code
reg_choose_nleqslv_method Source code
reg_index_for_parameter Source code
reg_normalize_covariate Source code
reg_normalize_estimate Source code
reg_proportional_index Source code
reg_read_exposure_design Source code
reg_read_time.point Source code
reg_summarize_bootstrap Source code
reportEffects Source code
residuals_CIFs Source code
residuals_risk Source code
solveEstimatingEquation Source code
summary.cifcurve Man page Source code
summary.ciftest Source code
summary.polyreg Man page Source code
tbl_regression.polyreg Man page Source code
tidy.ciftest Source code
tidy.ciftest_mdir Source code
tidy.polyreg Man page Source code
tidy_df Source code
untangle.specials Source code
util_check_n_risk_type Source code
util_check_outcome_type Source code
util_check_outcome_type_for_analysis Source code
util_check_surv_type Source code
util_check_type_y Source code
util_detect_outcome_type Source code
util_get_event_time Source code
util_get_surv Source code
util_normalize_na_action Source code
util_normalize_outcome_type Source code
util_normalize_time_event Source code
util_read_surv Source code
util_resolve_weights Source code
util_validate_event_codes Source code
vcov.polyreg Man page Source code
cifmodeling documentation built on Nov. 11, 2026, 9:06 a.m.

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