tests/testthat/_snaps/cs_combined.md

In clinicalsignificance: A Toolbox for Clinical Significance Analyses in Intervention Studies

All arguments are set correctly

Argument `id` is missing with no default. A column containing patient-specific IDs must be supplied.

Argument `time` is missing with no default. A column identifying the individual measurements must be supplied.

Argument `outcome` is missing with no default. A column containing the outcome must be supplied.

`reliability` must be numeric but a `character` was supplied.

`reliability` must be between 0 and 1 but 1.1 was supplied.

`reliability` must be between 0 and 1 but -0.8 was supplied.

Results are correct

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", rci_method = "JT")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    JT
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 26 |  65.00%
  Improved     |  3 |   7.50%
  Unchanged    | 10 |  25.00%
  Deteriorated |  1 |   2.50%
  Harmed       |  0 |   0.00%

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", rci_method = "EN")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    EN
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 26 |  65.00%
  Improved     |  6 |  15.00%
  Unchanged    |  5 |  12.50%
  Deteriorated |  3 |   7.50%
  Harmed       |  0 |   0.00%

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", rci_method = "HLL")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    HLL
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 12 |  30.00%
  Improved     |  0 |   0.00%
  Unchanged    | 16 |  40.00%
  Deteriorated | 11 |  27.50%
  Harmed       |  1 |   2.50%

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", rci_method = "GLN")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    GLN
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 26 |  65.00%
  Improved     |  3 |   7.50%
  Unchanged    | 10 |  25.00%
  Deteriorated |  1 |   2.50%
  Harmed       |  0 |   0.00%

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", reliability_post = 0.5,
    rci_method = "NK")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    NK
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 26 |  65.00%
  Improved     |  2 |   5.00%
  Unchanged    | 11 |  27.50%
  Deteriorated |  1 |   2.50%
  Harmed       |  0 |   0.00%

Code
  cs_combined(claus_2020, id, time, hamd, pre = 1, post = 4, reliability = 0.8,
    m_functional = 8, sd_functional = 8, cutoff_type = "c", rci_method = "HA")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    HA
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 23 |  57.50%
  Improved     |  9 |  22.50%
  Unchanged    |  7 |  17.50%
  Deteriorated |  1 |   2.50%
  Harmed       |  0 |   0.00%


  Group Level Summary

  Category   | Percent
  --------------------
  Changed    |  90.31%
  Functional |  75.55%

Code
  cs_combined(claus_2020, id, time, hamd, m_functional = 8, sd_functional = 8,
    cutoff_type = "c", rci_method = "HLM")
Output

  ---- Clinical Significance Results ----

  Approach:  Combined
  Method:    HLM
  Better is: Lower

  Category     |  N | Percent
  ---------------------------
  Recovered    | 10 |  25.00%
  Improved     |  1 |   2.50%
  Unchanged    | 20 |  50.00%
  Deteriorated |  9 |  22.50%
  Harmed       |  0 |   0.00%

clinicalsignificance documentation built on Nov. 27, 2025, 5:06 p.m.