penet_large: A penetrance matrix relating the phenotypes in 'dat_large' to...
In clipp: Calculating Likelihoods by Pedigree Paring
penet_large R Documentation
A penetrance matrix relating the phenotypes in dat_large to three genotypes
Description
A matrix relating the phenotypes of dat_large to the three unphased
genotypes of a single biallelic, autosomal genetic locus.
The element penet_large[i,j] is the conditional probability of
the phenotypes (i.e. sex, aff and age) of the person
in row i of dat_large, given that
his or her genotype is j (here labelling the genotypes as 1, 2, 3,
where genotype 2 is the heterozygous genotype).
Usage
penet_large
Format
A matrix with 10,002 rows (corresponding to persons) and 3
columns (corresponding to genotypes).
Source
Simulated
clipp documentation built on Sept. 1, 2026, 5:07 p.m.
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| penet_large | R Documentation |
A penetrance matrix relating the phenotypes in dat_large to three genotypes
Description
A matrix relating the phenotypes of dat_large to the three unphased
genotypes of a single biallelic, autosomal genetic locus.
The element penet_large[i,j] is the conditional probability of
the phenotypes (i.e. sex, aff and age) of the person
in row i of dat_large, given that
his or her genotype is j (here labelling the genotypes as 1, 2, 3,
where genotype 2 is the heterozygous genotype).
Usage
penet_large
Format
A matrix with 10,002 rows (corresponding to persons) and 3 columns (corresponding to genotypes).
Source
Simulated
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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