Man pages for clootl
Fetch and Explore the Cornell Lab of Ornithology Open Tree of Life Avian Phylogeny

clootl_dataA complex data store used in the package.
extractTreeExtract a complete or pre-pruned phylogeny from the clootl...
get_avesdata_repoDownload the AvesData full repository
get_avesdata_repo_pathGet path to Aves Data folder
getCitationsIdentify contributing studies
sampleTreesExtract a cloud of trees from the complete Avian Phylogeny...
set_avesdata_repo_pathSet path to Aves Data folder
taxonomyGetLoad a bird taxonomy into the R environment
treeGetHelper to load a tree from a file into the R environment
clootl documentation built on April 24, 2026, 1:07 a.m.