cloudms2: Benchmark data set for cloudUtil
In cloudUtil: Cloud Utilization Plots
Description
The data set provides the measurements of benchmark using three compute
infrastructers namely uzh.ch Schroedinger, Amazon EC2 (region us-east.), and the
FGCZ internal compute server. The number crunshing was done by doing tandem mass
spectra peptide sequence assignments of a large scale proteomics Drosophila
experiment similar to the data processing published here [E. Brunner, et. al.,
NBT, 2007] having approx. 1800 (LC)-MS/MS runs, 8474960 fragment ion
spectra(tandem MS or MS2), identidying 498000 redundant and 72281 distinct
peptides, and 9124 proteins. The data volume is approx. 0.3TB splitted into ~1800
jobs.
Format
A data frame with 10969 rows and 15 variables
References
http://fgcz-transfer.uzh.ch/~cpanse/2011-10-24–pCloud.pdf
http://www.nature.com/nbt/journal/v25/n5/abs/nbt1300.html
cloudUtil documentation built on May 1, 2019, 10:56 p.m.
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Description
The data set provides the measurements of benchmark using three compute infrastructers namely uzh.ch Schroedinger, Amazon EC2 (region us-east.), and the FGCZ internal compute server. The number crunshing was done by doing tandem mass spectra peptide sequence assignments of a large scale proteomics Drosophila experiment similar to the data processing published here [E. Brunner, et. al., NBT, 2007] having approx. 1800 (LC)-MS/MS runs, 8474960 fragment ion spectra(tandem MS or MS2), identidying 498000 redundant and 72281 distinct peptides, and 9124 proteins. The data volume is approx. 0.3TB splitted into ~1800 jobs.
Format
A data frame with 10969 rows and 15 variables
References
http://fgcz-transfer.uzh.ch/~cpanse/2011-10-24–pCloud.pdf
http://www.nature.com/nbt/journal/v25/n5/abs/nbt1300.html
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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