initfastnmf.intern: initialize fastnmf

View source: R/initfastnmf.intern.R

initfastnmf.internR Documentation

initialize fastnmf

Description

initialize fastnmf

Usage

initfastnmf.intern(
  method,
  Mtilde,
  listpart = NULL,
  nb.clust = NULL,
  parameter.kmeans = list(nstart = 100, iter.max = 50, algorithm = c("Hartigan-Wong",
    "Lloyd", "Forgy", "MacQueen"), trace = FALSE),
  parameter.minibatchkmeans = list(batch_size = 10, num_init = 1, max_iters = 50,
    init_fraction = 1, initializer = "kmeans++", early_stop_iter = 10, verbose = FALSE,
    CENTROIDS = NULL, tol = 1e-04, tol_optimal_init = 0.3, seed = 1)
)

Arguments

method

a vector giving initialisation methods among "BOK", "kmeans", "minibatchkmeans" "sample"

Mtilde

a fuzzy connectivity matrix

listpart

a list of partitions (required for kmeans and minibatchkmeans method)

parameter.kmeans

list of arguments for kmeans function

parameter.minibatchkmeans

list of arguments for MiniBatchKmeans function


clusterMI documentation built on April 4, 2025, 12:55 a.m.