clusterhap: Clustering Genotypes in Haplotypes
Version 0.1

One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL (Quantitative Trait Loci). clusterhap groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, clusterhap groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, clusterhap calculates such probability from relative frequencies.

Package details

AuthorGaston Quero <> and Sebastian Simondi <> , with contributions from Victoria Bonnecarrere and Lucia Gutierrez
Date of publication2016-05-16 14:37:36
MaintainerGaston Quero <>
Package repositoryView on CRAN
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clusterhap documentation built on May 29, 2017, 2:11 p.m.