create_msms_body: Create MS/MS search POST request body

In cmmr: CEU Mass Mediator RESTful API

Description

create_msms_body returns a string of a POST request body.

Usage

create_msms_body(ion_mass, ms_ms_peaks, precursor_ion_tolerance = 500,
  precursor_ion_tolerance_mode = "mDa", precursor_mz_tolerance = 1000,
  precursor_mz_tolerance_mode = "mDa", ion_mode = "positive",
  ionizationVoltage = "all", spectra_types = "experimental")

Arguments

ion_mass	ion_mass
ms_ms_peaks	ms_ms_peaks
precursor_ion_tolerance	precursor_ion_tolerance
precursor_ion_tolerance_mode	precursor_ion_tolerance_mode
precursor_mz_tolerance	precursor_mz_tolerance
precursor_mz_tolerance_mode	precursor_mz_tolerance_mode
ion_mode	ion_mode
ionizationVoltage	ionizationVoltage
spectra_types	spectra_types

Value

If all inputs are all correctly formatted, a string of a POST request will be returned for the result.

Author(s)

Yaoxiang Li [e-mail]

Georgetown University, USA

License: GPL (>= 3)

cmmr documentation built on May 2, 2019, 10:14 a.m.