inst/colocr_app/tests/one_image.R

In colocr: Conduct Co-Localization Analysis of Fluorescence Microscopy Images

app <- ShinyDriver$new("../")
app$snapshotInit("one_image")

app$uploadFile(image1 = system.file('extdata', 'Image0001_.jpg', package = 'colocr'))
app$setInputs(threshold = 90)
app$setInputs(clean = 8)
app$setInputs(fill = 8)
app$setInputs(shrink = 6)
app$setInputs(roi_num = 2)
app$setInputs(name = "LC3")
app$setInputs(add = "click")
app$setInputs(add2 = "click")
app$uploadFile(image1 = system.file('extdata', 'Image0003_.jpg', package = 'colocr'))
app$setInputs(roi_num = 3)
app$setInputs(fill = 5)
app$setInputs(clean = 10)
app$setInputs(shrink = 8)
app$setInputs(fill = 10)
app$setInputs(name = "LC3 ")
app$setInputs(add = "click")
app$setInputs(add2 = "click")
#app$snapshotDownload("download_stats")
#app$snapshotDownload("download_inputs")
app$snapshot()