calc_distance: Distance calculations for spatial coord

In colorrepel: Repel Visually Similar Colors for Colorblind Users in Various Plots

Distance calculations for spatial coord

Description

Distance calculations for spatial coord

Usage

calc_distance(
  coord,
  metadata,
  cluster_col = "cluster",
  collapse_to_cluster = FALSE
)

Arguments

coord	dataframe or matrix of spatial coordinates, cell barcode as rownames
metadata	data.frame or vector containing cluster assignments per cell. Order must match column order in supplied matrix. If a data.frame provide the cluster_col parameters.
cluster_col	column in metadata with cluster number
collapse_to_cluster	instead of reporting min distance to cluster per cell, summarize to cluster level

Value

min distance matrix

colorrepel documentation built on Aug. 8, 2025, 7:12 p.m.