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An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.
Package details 


Author  Max Leiserson [aut, cre], HsinTa Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb] 
Date of publication  20151031 19:34:25 
Maintainer  Max Leiserson <mdml@cs.brown.edu> 
License  MIT + file LICENSE 
Version  0.1.3 
URL  http://compbio.cs.brown.edu/projects/comet http://www.rproject.org 
Package repository  View on CRAN 
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