cometExactTest: Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.

AuthorMax Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]
Date of publication2015-10-31 19:34:25
MaintainerMax Leiserson <mdml@cs.brown.edu>
LicenseMIT + file LICENSE
Version0.1.3
http://compbio.cs.brown.edu/projects/comet, http://www.r-project.org

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Files

cometExactTest
cometExactTest/inst
cometExactTest/inst/CITATION
cometExactTest/src
cometExactTest/src/cometexacttest.c
cometExactTest/NAMESPACE
cometExactTest/R
cometExactTest/R/cometexacttest.R
cometExactTest/MD5
cometExactTest/DESCRIPTION
cometExactTest/man
cometExactTest/man/figures
cometExactTest/man/figures/tablex.pdf
cometExactTest/man/figures/tablex.png
cometExactTest/man/comet.Rd
cometExactTest/LICENSE

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