cometExactTest: Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.

Getting started

Package details

AuthorMax Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]
MaintainerMax Leiserson <[email protected]>
LicenseMIT + file LICENSE
Version0.1.5
URL http://compbio.cs.brown.edu/projects/comet https://www.r-project.org
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("cometExactTest")

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cometExactTest documentation built on Jan. 30, 2018, 1:05 a.m.