cometExactTest: Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.

Install the latest version of this package by entering the following in R:
install.packages("cometExactTest")
AuthorMax Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]
Date of publication2015-10-31 19:34:25
MaintainerMax Leiserson <mdml@cs.brown.edu>
LicenseMIT + file LICENSE
Version0.1.3
http://compbio.cs.brown.edu/projects/comet, http://www.r-project.org

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Files

inst
inst/CITATION
src
src/cometexacttest.c
NAMESPACE
R
R/cometexacttest.R
MD5
DESCRIPTION
man
man/figures
man/figures/tablex.pdf
man/figures/tablex.png
man/comet.Rd
LICENSE

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