NEWS.md

In condathis: Run Any CLI Tool on a 'Conda' Environment

condathis 0.1.1

Minor improvements and fixes

• Internal micromamba version bump to "2.0.5-0".

• Fix error in run_bin() when error = "continue" and cmd is not on PATH nor in the environment. The expected behavior is to not fail (#23).

condathis 0.1.0

• Initial submission to CRAN.

condathis 0.0.8

Breaking changes

• env_exists() now error if no argument is supplied.

• The base directory path used for creating the environments is now controlled by tools::R_user_dir() and accepts R_USER_DATA_DIR, and XDG_DATA_HOME, respectively as environment variables that can control that path. On Unix/Linux it should be "${HOME}/.local/share/R/condathis".

• The default TMPDIR for all run() and run_bin() calls are clean after execution.

• All error messages are resurfaced in the exported function call instead of being thrown in the internal processx call.

• New classes were added to the error condition in most functions.

New features

Minor improvements and fixes

• Improved error message in list_packages() when environment doesn't exist (#21).

• Improved message in install_packages().

• Spinner is only active when session is interactive.

• New with_sandbox_dir() allow for isolated tests and examples.

condathis 0.0.7

New features

• install_micromamba() now tries to download an uncompressed version of the 'micromamba' binary if untar() fails because of missing bzip2 system library. (#10 and #14)

• New parse_output() parse lines output streams from run() results into character vectors.

• New run_bin() runs binary installed in a Conda environment without wrapping in micromamba run.

Minor improvements and fixes

• Internal micromamba version bump to "2.0.4-0".

• create_env() and remove_env() have improved output.

condathis 0.0.6

Breaking changes

• method = "auto" no longer exists. For backward compatibility will fall back to method = "native".
• All container back-end methods were removed and method = "native" is the only method supported using just this package.
• A method for supplying additional backends from other packages is planned to be implemented.

Minor improvements and fixes

• Remove dependency on dockerthis.

• Fix error in run() when verbose argument was not supplied.

condathis 0.0.5

Breaking changes

• verbose, levels TRUE and FALSE are now soft deprecated. For previous functionality "full" and "silent" should be used respectively.

New features

• run() now has error argument.

Minor improvements and fixes

• run() output now has class "condathis_run_output" with custom print method.
• run() now exposes stderr.
• verbose now accept any of c("silent", "full", "cmd", "output"). TRUE and FALSE are deprecated but still kept for compatibility.

condathis 0.0.4

Breaking changes

• create_env() new argument default overwrite = FALSE, since the previous behavior would allow for the environment to always be overwritten. For previous behavior use overwrite = TRUE.

• Across the entire package verbose = FALSE is default.

New features

• New get_env_dir() retrieves path to environment v(0.0.3.9032).

• create_env() now has overwrite = FALSE argument v(0.0.3.9030).

• install_micromamba() now has micromamba_version argument (v0.0.3.9025).

• Add support for internal micromamba versions above v2.0 (v0.0.3.9024).

• New remove_env() created (v0.0.3.9012 #7).

Minor improvements and fixes

• native_cmd() now uses additional Environmental Variables for removing warnings when calling nested micromamba run (v0.0.3.9029 #13).

• Standardize argument order passed to micromamba, since v2.0, order of some arguments starts to conflict (v0.0.3.9027).

• On Windows, the "BAT" file used by micromamba run is renamed (v0.0.3.9026 #11).

• Internal micromamba version is upgraded to "2.0.2-0", fixes warnings about missing prefixes (v0.0.3.9028).

• The internal micromamba version is now fixed (currently "v2.0.1-0") (v0.0.3.9025).

• Use GitHub releases as the primary URL for installing micromamba (v0.0.3.9025).

• Move --no-rc and --no-env arguments to native_cmd() (v0.0.3.9024).

• Fix path handling in Windows (v0.0.3.9023).

• Add mode = "wb" to internal download.file() for handling binary downloads in Windows (v0.0.3.9023).

• list_envs() and list_packages() uses --no-rc internally (v.0.0.3.9022).

• create_env_*(), packages_search_*(), and install_packages() now uses --no-rc and --override-channels (v0.0.3.9020).

• Remove "defaults" channel (-c defaults) from all functions (v0.0.3.9020).

• create_env_*(), packages_search_*(), and install_packages() uses --no-channel-priority internally (v0.0.3.9019).

condathis documentation built on April 12, 2025, 2:01 a.m.