corTools: Tools for processing data after a Genome Wide Association Study

Share:

Designed for analysis of the results of a Genome Wide Association Study. Includes tools to pull lists of Chromosome number and SNP position below a certain significance threshold, refine gene networks (including data I/O for Cytoscape), and check SNP base pair changes.

Author
Angela Fan
Date of publication
2013-08-23 18:47:41
Maintainer
Angela Fan <angela.h.fan@gmail.com>
License
Artistic License 2.0
Version
1.0

View on CRAN

Man pages

candpull
Finds Candidate Genes
corTools-package
Tools for processing data after a Genome Wide Association...
cytosub
Dataset Subsetter
dist
Distribution Generator
edgecount
Edge counter
edgecutoff
Identifies Hubs
syncheck
Identifies Base Pair Change
traitcombos
Trait combination calculator

Files in this package

corTools
corTools/NAMESPACE
corTools/R
corTools/R/corTools.R
corTools/MD5
corTools/DESCRIPTION
corTools/man
corTools/man/corTools-package.Rd
corTools/man/traitcombos.Rd
corTools/man/syncheck.Rd
corTools/man/edgecutoff.Rd
corTools/man/edgecount.Rd
corTools/man/dist.Rd
corTools/man/candpull.Rd
corTools/man/cytosub.Rd