ebicPlot: Extended Bayesian Information Criterion Plot

In countprop: Calculate Model-Based Metrics of Proportionality on Count-Based Compositional Data

Extended Bayesian Information Criterion Plot

Description

Plots the extended Bayesian information criterion (EBIC) of the model fit for various penalization parameters lambda.

Usage

ebicPlot(fit, xlog = TRUE, col = "darkred")

Arguments

fit	The model fit object from mleLR()
xlog	TRUE or FALSE. Renders plot with the x-axis in the log-scale if TRUE
col	Colour of the plot (character)

Value

Plot of the EBIC (y-axis) against each lambda (x-axis).

Examples

data(singlecell)
mle <- mlePath(singlecell, tol=1e-4, tol.nr=1e-4, n.lambda = 2, n.cores = 1)

ebicPlot(mle, xlog = TRUE)

countprop documentation built on Aug. 18, 2023, 9:06 a.m.