Man pages for covidregionaldata
Subnational Data for COVID-19 Epidemiology

add_extra_na_colsAdd extra columns filled with NA values to a dataset.
all_country_dataTable of available datasets along with level and other...
BelgiumBelgium Class for downloading, cleaning and processing...
BrazilBrazil Class for downloading, cleaning and processing...
calculate_columns_from_existing_dataCumulative counts from daily counts or daily counts from...
CanadaCanada Class containing origin specific attributes and...
check_levelChecks a given level is supported
ColombiaColombia Class for downloading, cleaning and processing...
colombia_codesRegion Codes for Colombia Dataset.
complete_cumulative_columnsCompletes cumulative columns if rows were added with NAs.
CountryDataClassR6 Class containing national level methods
Covid19DataHubR6 Class containing specific attributes and methods for...
csv_readerCustom CSV reading function
CubaCuba Class for downloading, cleaning and processing...
DataClassR6 Class containing non-dataset specific methods
download_excelDownload Excel Documents
ECDCR6 Class containing specific attributes and methods for the...
EstoniaEstonia Class for downloading, cleaning and processing...
expect_clean_colsTest clean columns contain the correct data and types
expect_columns_contain_dataTest that cleaned columns contain data/
expect_processed_colsTest that processed columns contain the correct data and...
fill_empty_dates_with_naAdd rows of NAs for dates where a region does not have any...
FranceFrance Class containing origin specific attributes and...
france_codesRegion Codes for France Dataset.
GermanyGermany Class for downloading, cleaning and processing...
get_available_datasetsGet supported data sets
get_linelistGet patient line list data
get_national_dataGet national-level data for countries globally from a range...
get_regional_dataGet regional-level data
glue_levelGlue the spatial level into a variable name
GoogleR6 Class containing specific attributes and methods for...
IndiaIndia Class for downloading, cleaning and processing...
initialise_dataclassInitialise a child class of DataClass if it exists
ItalyItaly Class for downloading, cleaning and processing...
JHUR6 Class containing specific attributes and methods for John...
JHU_codesRegion Codes for JHU Dataset. Taken from the region codes...
JRCR6 Class containing specific attributes and methods for...
json_readerCustom JSON reading function
LithuaniaLithuania Class for downloading, cleaning and processing...
lithuania_codesRegion Codes for Lithuania Dataset.
make_github_workflowCreate github action for a given source
make_new_data_sourceCreate new country class for a given source
message_verboseWrapper for message
MexicoMeixco Class for downloading, cleaning and processing...
mexico_codesRegion Codes for Mexico Dataset.
NetherlandsNetherlands Class for downloading, cleaning and processing...
process_internalInternal Shared Regional Dataset Processing
reexportsObjects exported from other packages
region_dispatchControl Grouping Variables used in process_internal
reset_cacheReset Cache and Update all Local Data
return_dataControl data return
run_default_processing_fnsDefault processing steps to run
run_optional_processing_fnsOptional processing steps to run
set_negative_values_to_zeroSet negative data to 0
SouthAfricaSouthAfrica Class for downloading, cleaning and processing...
start_using_memoiseAdd useMemoise to options
stop_using_memoiseStop using useMemoise
SwitzerlandSwitzerland Class for downloading, cleaning and processing...
test_cleaningTest clean method works correctly
test_downloadTest download method works correctly
test_download_JSONTest download method for JSON files works correctly
test_processingTest process method works correctly
test_returnTest return method works correctly
totalise_dataGet totals data given the time series data.
UKUnited Kingdom Class for downloading, cleaning and processing...
uk_codesRegion Codes for UK Dataset.
USAUSA Class for downloading, cleaning and processing...
vietnam_codesRegion Codes for Vietnam Dataset.
WHOR6 Class containing specific attributes and methods for World...
covidregionaldata documentation built on Feb. 7, 2022, 9:07 a.m.