cp4p: Calibration Plot for Proteomics

Functions to check whether a vector of p-values respects the assumptions of FDR (false discovery rate) control procedures and to compute adjusted p-values.

Install the latest version of this package by entering the following in R:
install.packages("cp4p")
AuthorQuentin Giai Gianetto, Florence Combes, Claire Ramus, Christophe Bruley, Yohann Couté, Thomas Burger
Date of publication2016-05-16 16:21:27
MaintainerQuentin Giai Gianetto <quentin2g@yahoo.fr>
LicenseGPL-3
Version0.3.5

View on CRAN

Files

inst
inst/tutorial-cp4p.pdf
NAMESPACE
data
data/LFQRatio2.rda
data/datalist
data/datalist/LFQRatio2.rda
data/datalist/LFQRatio25.rda
data/LFQRatio25.rda
R
R/estim_pi0.R R/calibration_plot.R R/adjust_p.R
MD5
DESCRIPTION
man
man/LFQRatio25.Rd man/cp4p-package.Rd man/estim.pi0.Rd man/calibration.plot.Rd man/adjust.p.Rd man/LFQRatio2.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.