Man pages for ct
Camera Trap Data Management and Multi-Method Ecological Analysis
| ACBR | Camera trap dataset from Agbogon Community Biological Reserve... |
| bootstrap | Generate bootstrap estimates of overlap |
| calc_active_periods | Calculate active periods for camera trap data |
| ct_alpha_diversity | Alpha diversity index |
| ct_availability | Temporal availability adjustment |
| ct_boot_ci | Bootstrap confidence intervals |
| ct_camera_day | Calculate daily camera trap captures |
| ct_camtrap_animal_distance | Estimate distance from camera trap to animal |
| ct_check_location | Interactive camera trap location adjustment |
| ct_check_name | Check species name and retrieve Taxonomic Serial Number (TSN)... |
| ct_chi2_select | Select best detection function model by Chi-squared... |
| ct_ci | Calculate confidence interval |
| ct_clone_dir | Clone directory structure |
| ct_convert_unit | Convert values between different units |
| ct_correct_datetime | Correct camera trap datetime records |
| ct_create_hs | Create or add hierarchical subject (hs) values in image... |
| ct_describe_df | Descriptive statistic on dataset |
| ct_dissimilarity | Calculate dissimilarity between communities |
| ctdp | Camera trap data package example |
| ct_dp_example | Read the Camtrap DP example dataset |
| ct_dp_filter | Filter camera trap data package |
| ct_dp_read | Read camera trap data package |
| ct_dp_table | Get core tables |
| ct_dp_version | Get Camtrap DP version Extracts the version number used by a... |
| ct_exiftool_call | Call ExifTool |
| ct_find_break | Detect time gaps in a datetime series |
| ct_fit_activity | Fit activity model to time-of-day data |
| ct_fit_detmodel | Fit animal detection |
| ct_fit_distribution | Fit a count distribution by maximum likelihood |
| ct_fit_ds | Fit detection functions and estimate density/abundance |
| ct_fit_encounter_response | Fit a conditional encounter-response model for camera-trap... |
| ct_fit_ise | Estimate abundance from Instantaneous Sampling (ISE) Data |
| ct_fit_rem | Fit Random Encounter Model (REM) |
| ct_fit_rest | Fit the Random Encounter and Staying Time (REST / RAD-REST)... |
| ct_fit_speedmodel | Fit animal speed model |
| ct_fit_ste | Estimate abundance from Space-To-Event (STE) Data |
| ct_fit_tte | Estimate abundance from Time-To-Event (TTE) Data |
| ct_get_effort | Calculate camera trap deployment effort |
| ct_get_hs | Retrieve hierarchical subject (hs) values from image metadata |
| ct_independence | Evaluate independent detections |
| ct_inext | Interpolation and extrapolation of Hill number |
| ct_install_exiftool | Install ExifTool, downloading (by default) the current... |
| ct_overlap_estimates | Estimates of coefficient of overlapping |
| ct_overlap_matrix | Estimate overlap coefficients for multiple species |
| ct-package | ct: Camera Trap Data Management and Multi-Method Ecological... |
| ct_plot_calendar | Plot a calendar heatmap of daily camera trap activity |
| ct_plot_camtrap_activity | Plot camera trap activity over time |
| ct_plot_density | Plot species' activity patterns |
| ct_plot_inext | Plot diversity interploation and extrapolation |
| ct_plot_overlap | Plot overlap between two species' activity patterns |
| ct_plot_overlap_coef | Plot overlap coefficient matrix |
| ct_plot_rose_diagram | Plot a 24-hour rose diagram of daily activity |
| ct_QAIC | Compute QAIC for a set of detection function models |
| ct_read | Read a delimited file into a tibble |
| ct_read_metadata | Read Image Metadata |
| ct_remove_hs | Remove hierarchical subject (hs) values from image metadata |
| ct_rest_activity | Prepare activity (time-of-day) data for REST |
| ct_rest_effort | Add camera-trapping effort (days) to formatted station data |
| ct_rest_passes | Aggregate the number of animal passes per station for REST /... |
| ct_rest_select_stay | Choose a staying-time distribution for REST by WAIC |
| ct_rest_stay | Prepare staying-time data for REST |
| ct_select_model | Model selection for Distance Sampling detection functions |
| ct_solartime | Transform time to solar time anchored to sunrise and sunset |
| ct_spatial_coverage | Estimate species spatial coverage from camera trap detections |
| ct_stack_df | Stack a list of data frame |
| ct_standardize | Standardize community data matrix |
| ct_summarise_camtrap_activity | Create activity summary statistics |
| ct_survey_design | Create a survey design for camera trap deployment |
| ct_temporal_shift | Calculate the temporal shift of one species' activity over... |
| ct_to_community | Convert data to a community matrix |
| ct_to_occupancy | Convert camera trap data to occupancy format |
| ct_to_radian | Convert time to radians |
| ct_to_time | Convert radian to time |
| ct_traprate_data | Prepare data for trap rate estimation |
| ct_traprate_estimate | Estimate trap rate |
| download_exiftool | Download the current version of ExifTool |
| duikers | Maxwell's duiker camera-trap distance & video-start data |
| exiftool_version | Get ExifTool Version |
| find_exiftool | Find ExifTool Executable |
| find_exiftool_path | Find ExifTool Path |
| get_os | Get Operating System |
| lama | Camera trap survey of the Lama Classified Forest |
| lnorm_confint | Log-normal confidence interval |
| parse_hs | Parse Hierarchical Subjects into a Tibble |
| pendjari | Pendjari national park and surrounding areas |
| penessoulou | Camera-trap detections from the Penessoulou Classified Forest |
| pipe | Pipe operators |
| print.ct_rest | Print method for ct_rest objects |
| print.ct_rest_stay | Print method for ct_rest_stay objects |
| rest_detection | Simulated camera-trap detections for the REST / RAD-REST... |
| rest_station | Camera-station table for the REST / RAD-REST example |
| R_user_dir | Determine the Per-User Directory for R Package Data, Config,... |
