get_bioactivity_details: Retrieve bioactivity data from DTXSID, AEID, SPID, or m4id

In ctxR: Utilities for Interacting with the 'CTX' APIs

Retrieve bioactivity data from DTXSID, AEID, SPID, or m4id

Description

Retrieve bioactivity data from DTXSID, AEID, SPID, or m4id

Usage

get_bioactivity_details(
  DTXSID = NULL,
  AEID = NULL,
  SPID = NULL,
  m4id = NULL,
  API_key = NULL,
  Server = bioactivity_api_server,
  verbose = FALSE
)

Arguments

DTXSID	The chemical identifier DTXSID
AEID	The assay endpoint identifier AEID
SPID	The ChemSpider chemical input
m4id	The chemical identifier m4id
API_key	The user-specific API key
Server	The root address for the API endpoint
verbose	A logical indicating if some “progress report” should be given.

Value

A data.frame containing bioactivity information for the chemical or assay endpoint with identifier matching the input parameter.

Examples

# Pull BPA bioactivity details
bpa <- get_bioactivity_details(DTXSID = 'DTXSID7020182')
# Pull assay bioactivity details
assay <- get_bioactivity_details(AEID = 159)

ctxR documentation built on April 12, 2025, 2:07 a.m.