suave: Integration with SUbregion-Adaptive Vegas Algorithm

View source: R/suave.R

suaveR Documentation

Integration with SUbregion-Adaptive Vegas Algorithm

Description

Suave uses vegas()-like importance sampling combined with a globally adaptive subdivision strategy: Until the requested accuracy is reached, the region with the largest error at the time is bisected in the dimension in which the fluctuations of the integrand are reduced most. The number of new samples in each half is prorated for the fluctuation in that half.

Usage

suave(
  f,
  nComp = 1L,
  lowerLimit,
  upperLimit,
  ...,
  relTol = 1e-05,
  absTol = 1e-12,
  minEval = 0L,
  maxEval = 10^6,
  flags = list(verbose = 0L, final = 1L, smooth = 0L, keep_state = 0L, level = 0L),
  rngSeed = 0L,
  nVec = 1L,
  nNew = 1000L,
  nMin = 50L,
  flatness = 50,
  stateFile = NULL
)

Arguments

f

The function (integrand) to be integrated as in cuhre(). Optionally, the function can take two additional arguments in addition to the variable being integrated: - cuba_weight which is the weight of the point being sampled, - cuba_iter the current iteration number. The function author may choose to use these in any appropriate way or ignore them altogether.

nComp

The number of components of f, default 1, bears no relation to the dimension of the hypercube over which integration is performed.

lowerLimit

The lower limit of integration, a vector for hypercubes.

upperLimit

The upper limit of integration, a vector for hypercubes.

...

All other arguments passed to the function f.

relTol

The maximum tolerance, default 1e-5.

absTol

the absolute tolerance, default 1e-12.

minEval

the minimum number of function evaluations required

maxEval

The maximum number of function evaluations needed, default 10^6. Note that the actual number of function evaluations performed is only approximately guaranteed not to exceed this number.

flags

flags governing the integration. The list here is exhaustive to keep the documentation and invocation uniform, but not all flags may be used for a particular method as noted below. List components:

verbose

encodes the verbosity level, from 0 (default) to 3. Level 0 does not print any output, level 1 prints reasonable information on the progress of the integration, level 2 also echoes the input parameters, and level 3 further prints the subregion results.

final

when 0, all sets of samples collected on a subregion during the various iterations or phases contribute to the final result. When 1, only the last (largest) set of samples is used in the final result.

smooth

Applies to Suave and Vegas only. When 0, apply additional smoothing to the importance function, this moderately improves convergence for many integrands. When 1, use the importance function without smoothing, this should be chosen if the integrand has sharp edges.

keep_state

when nonzero, retain state file if argument stateFile is non-null, else delete stateFile if specified.

load_state

Applies to Vegas only. Reset the integrator state even if a state file is present, i.e. keep only the grid. Together with keep_state this allows a grid adapted by one integration to be used for another integrand.

level

applies only to Divonne, Suave and Vegas. When 0, Mersenne Twister random numbers are used. When nonzero Ranlux random numbers are used, except when rngSeed is zero which forces use of Sobol quasi-random numbers. Ranlux implements Marsaglia and Zaman's 24-bit RCARRY algorithm with generation period p, i.e. for every 24 generated numbers used, another p-24 are skipped. The luxury level for the Ranlux generator may be encoded in level as follows:

Level 1 (p = 48)

gives very long period, passes the gap test but fails spectral test

Level 2 (p = 97)

passes all known tests, but theoretically still defective

Level 3 (p = 223)

any theoretically possible correlations have very small chance of being observed

Level 4 (p = 389)

highest possible luxury, all 24 bits chaotic

Levels 5-23

default to 3, values above 24 directly specify the period p. Note that Ranlux's original level 0, (mis)used for selecting Mersenne Twister in Cuba, is equivalent to level = 24

rngSeed

seed, default 0, for the random number generator. Note the articulation with level settings for flag

nVec

the number of vectorization points, default 1, but can be set to an integer > 1 for vectorization, for example, 1024 and the function f above needs to handle the vector of points appropriately. See vignette examples.

nNew

the number of new integrand evaluations in each subdivision.

nMin

the minimum number of samples a former pass must contribute to a subregion to be considered in that region's compound integral value. Increasing nmin may reduce jumps in the \chi^2 value.

flatness

the parameter p, or the type of norm used to compute the fluctuation of a sample. This determines how prominently "outliers," i.e. individual samples with a large fluctuation, figure in the total fluctuation, which in turn determines how a region is split up. As suggested by its name, flatness should be chosen large for "flat" integrands and small for "volatile" integrands with high peaks. Note that since flatness appears in the exponent, one should not use too large values (say, no more than a few hundred) lest terms be truncated internally to prevent overflow.

stateFile

the name of an external file. Vegas can store its entire internal state (i.e. all the information to resume an interrupted integration) in an external file. The state file is updated after every iteration. If, on a subsequent invocation, Vegas finds a file of the specified name, it loads the internal state and continues from the point it left off. Needless to say, using an existing state file with a different integrand generally leads to wrong results. Once the integration finishes successfully, i.e. the prescribed accuracy is attained, the state file is removed. This feature is useful mainly to define ‘check-points’ in long-running integrations from which the calculation can be restarted.

Details

See details in the documentation.

Value

A list with components:

nregions

the actual number of subregions needed

neval

the actual number of integrand evaluations needed

returnCode

if zero, the desired accuracy was reached, if -1, dimension out of range, if 1, the accuracy goal was not met within the allowed maximum number of integrand evaluations.

integral

vector of length nComp; the integral of integrand over the hypercube

error

vector of length nComp; the presumed absolute error of integral

prob

vector of length nComp; the \chi^2-probability (not the \chi^2-value itself!) that error is not a reliable estimate of the true integration error.

References

T. Hahn (2005) CUBA-a library for multidimensional numerical integration. Computer Physics Communications, 168, 78-95.

See Also

cuhre(), divonne(), vegas()

Examples


integrand <- function(arg) {
  x <- arg[1]
  y <- arg[2]
  z <- arg[3]
  ff <- sin(x)*cos(y)*exp(z);
return(ff)
} # end integrand
suave(integrand, lowerLimit = rep(0, 3), upperLimit = rep(1, 3),
             relTol=1e-3,  absTol=1e-12,
             flags=list(verbose=2, final=0))


cubature documentation built on Sept. 11, 2024, 6:51 p.m.