Man pages for cyjShiny
Cytoscape.js Shiny Widget (cyjShiny)
| addGraphFromDataFrame | Add graph from data.frame |
| addGraphFromJsonFile | Add graph from JSON file |
| clearSelection | Clear selection all node and edge selections removed |
| cyjShiny | cyjShiny cyjShiny |
| cyjShinyOutput | Standard shiny ui rendering construct |
| dataFramesToJSON | Create a cytoscape.js JSON graph from one or two data.frames. |
| doLayout | Layout the current graph using the specified strategy. |
| fit | Set zoom and center of the graph display so that graph fills... |
| fitSelected | Set zoom and center of the graph display so that the... |
| getNodePositions | Get node positions |
| getSelectedNodes | Get Selected Nodes |
| graphNELtoJSON | Convert R graphNEL object to cytoscape.js JSON. |
| hideSelection | Hide selection all selected nodes and their edges are hidden |
| invertSelection | Invert selection all selected nodes and their edges are... |
| loadNetworkFromJSONFile | Load a standard cytoscape.js JSON network file |
| loadStyleFile | Load a standard cytoscape.js style file |
| readAndStandardizeJSONNetworkFile | Read in a JSON network file, identify (or add) elements field... |
| readAndStandardizeJSONStyleFile | Read in a JSON file, extract the selector elements, return... |
| removeGraph | Remove the current graph |
| renderCyjShiny | More shiny plumbing - a cyjShiny wrapper for htmlwidget... |
| savePNGtoFile | Save a png rendering of the current network view to the... |
| selectFirstNeighbors | Select first neighbors of the currently selected nodes |
| selectNodes | Select Nodes |
| setEdgeAttributes | Assign the supplied edge attribute values to the graph... |
| setNodeAttributes | Assign the supplied node attribute values to the graph... |
| setNodePositions | Set node positions from the supplied data.frame |
| showAll | Show all all selected nodes and their edges are hidden |
