cystiSim: Agent-Based Model for Taenia_solium Transmission and Control

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The cystiSim package provides an agent-based model for Taenia solium transmission and control. cystiSim was developed within the framework of CYSTINET, the European Network on taeniosis/cysticercosis, COST ACTION TD1302.

Author
Brecht Devleesschauwer [aut, cre], Uffe Christian Braae [aut]
Date of publication
2016-05-15 21:46:33
Maintainer
Brecht Devleesschauwer <brechtdv@gmail.com>
License
GPL (>= 2)
Version
0.1.0
URLs

View on CRAN

Man pages

baseline
Random baseline populations
cystiRun
'cystiRun' object
cystiSim
'cystiSim' object
cystiSim-package
Agent-based model for _Taenia solium_ transmission and...
do_man_mda
Do human mass drug administration(MDA)
do_pig_mda
Do pig mass drug administration (MDA)
do_pig_mda_vac
Do pig mass drug administration (MDA) and vaccination
do_pig_vac
Do pig vaccination
fit
Fit cystiSim parameters
man_mbeya
Mbeya human population
man_mbozi
Mbozi human population
pig_mbeya
Mbeya pig population
pig_mbozi
Mbozi pig population
slaughter
Pig slaughter functions

Files in this package

cystiSim
cystiSim/inst
cystiSim/inst/cystiSim.Rnw
cystiSim/NAMESPACE
cystiSim/NEWS
cystiSim/data
cystiSim/data/pig_mbeya.RData
cystiSim/data/man_mbeya.RData
cystiSim/data/man_mbozi.RData
cystiSim/data/pig_mbozi.RData
cystiSim/R
cystiSim/R/cystiRun-methods.R
cystiSim/R/interventions.R
cystiSim/R/model.R
cystiSim/R/cystiSim.R
cystiSim/R/fit.R
cystiSim/R/baseline.R
cystiSim/README.md
cystiSim/MD5
cystiSim/DESCRIPTION
cystiSim/man
cystiSim/man/cystiSim-package.Rd
cystiSim/man/do_pig_mda_vac.Rd
cystiSim/man/slaughter.Rd
cystiSim/man/fit.Rd
cystiSim/man/pig_mbozi.Rd
cystiSim/man/cystiRun.Rd
cystiSim/man/baseline.Rd
cystiSim/man/man_mbozi.Rd
cystiSim/man/cystiSim.Rd
cystiSim/man/do_man_mda.Rd
cystiSim/man/do_pig_mda.Rd
cystiSim/man/man_mbeya.Rd
cystiSim/man/pig_mbeya.Rd
cystiSim/man/do_pig_vac.Rd