codaMCMC-class: Class '"codaMCMC"'

In dcmle: Hierarchical Models Made Easy with Data Cloning

Class "codaMCMC"

Description

An S4 representation of an mcmc.lits object of the coda package.

Objects from the Class

Objects can be created by calls of the form new("codaMCMC", ...).

Slots

values:

Object of class "numeric", values from the posterior sample of length niter * nvar * nchains.

varnames:

Object of class "character", variable names.

start:

Object of class "integer", start of iterations.

end:

Object of class "integer", end of iterations.

thin:

Object of class "integer", thinning value.

nchains:

Object of class "integer", number of chains.

niter:

Object of class "integer", number of iterations.

nvar:

Object of class "integer", number of variables

Methods

[

signature(x = "codaMCMC"): ...

[[

signature(x = "codaMCMC"): ...

acfplot

signature(x = "codaMCMC"): ...

as.array

signature(x = "codaMCMC"): ...

as.matrix

signature(x = "codaMCMC"): ...

as.mcmc.list

signature(x = "codaMCMC"): ...

autocorr.diag

signature(mcmc.obj = "codaMCMC"): ...

chanames

signature(x = "codaMCMC"): ...

chisq.diag

signature(x = "codaMCMC"): ...

coef

signature(object = "codaMCMC"): ...

coerce

signature(from = "codaMCMC", to = "dcmle"): ...

coerce

signature(from = "codaMCMC", to = "MCMClist"): ...

coerce

signature(from = "dcmle", to = "codaMCMC"): ...

coerce

signature(from = "MCMClist", to = "codaMCMC"): ...

confint

signature(object = "codaMCMC"): ...

crosscorr.plot

signature(x = "codaMCMC"): ...

crosscorr

signature(x = "codaMCMC"): ...

cumuplot

signature(x = "codaMCMC"): ...

dcdiag

signature(x = "codaMCMC"): ...

dcsd

signature(object = "codaMCMC"): ...

dctable

signature(x = "codaMCMC"): ...

densityplot

signature(x = "codaMCMC"): ...

densplot

signature(x = "codaMCMC"): ...

end

signature(x = "codaMCMC"): ...

frequency

signature(x = "codaMCMC"): ...

gelman.diag

signature(x = "codaMCMC"): ...

gelman.plot

signature(x = "codaMCMC"): ...

geweke.diag

signature(x = "codaMCMC"): ...

head

signature(x = "codaMCMC"): ...

heidel.diag

signature(x = "codaMCMC"): ...

lambdamax.diag

signature(x = "codaMCMC"): ...

mcpar

signature(x = "codaMCMC"): ...

nchain

signature(x = "codaMCMC"): ...

nclones

signature(x = "codaMCMC"): ...

niter

signature(x = "codaMCMC"): ...

nvar

signature(x = "codaMCMC"): ...

pairs

signature(x = "codaMCMC"): ...

plot

signature(x = "codaMCMC", y = "missing"): ...

qqmath

signature(x = "codaMCMC"): ...

quantile

signature(x = "codaMCMC"): ...

raftery.diag

signature(x = "codaMCMC"): ...

show

signature(object = "codaMCMC"): ...

stack

signature(x = "codaMCMC"): ...

start

signature(x = "codaMCMC"): ...

summary

signature(object = "codaMCMC"): ...

tail

signature(x = "codaMCMC"): ...

thin

signature(x = "codaMCMC"): ...

time

signature(x = "codaMCMC"): ...

traceplot

signature(x = "codaMCMC"): ...

varnames

signature(x = "codaMCMC"): ...

vcov

signature(object = "codaMCMC"): ...

window

signature(x = "codaMCMC"): ...

xyplot

signature(x = "codaMCMC"): ...

Author(s)

Peter Solymos

See Also

mcmc.list

Examples

showClass("codaMCMC")

dcmle documentation built on July 9, 2023, 6:41 p.m.