API for deGradInfer
Parameter Inference for Systems of Differential Equation
| Global functions | |
|---|---|
| LV_example_dataset | Man page |
| adjustExchangeProposal | Source code |
| adjustProposal | Source code |
| agm | Man page Source code |
| calculateLogGPPrior | Source code |
| calculateLogLikelihood | Source code |
| calculateLogLikelihoodExplicit | Source code |
| calculateLogLikelihoodMCMC | Source code |
| calculateLogLikelihoodSpecies | Source code |
| calculateLogParamPrior | Source code |
| covUtilPreCalc | Source code |
| doMCMC | Man page Source code |
| exchangeChains | Source code |
| fitGP | Source code |
| fitModel | Source code |
| getGPCovs | Source code |
| getGPCovsRBF | Source code |
| getGPCovsSigmoid | Source code |
| getGPCovsSigmoidVar | Source code |
| getODEGradient | Man page Source code |
| likelihoodUtil | Source code |
| periodicKernParamInit | Source code |
| proposeGP | Source code |
| proposeLambda | Source code |
| proposeParams | Source code |
| proposeParamsMCMC | Man page Source code |
| proposeX | Source code |
| resetAndUpdateRates | Source code |
| sampleGP | Source code |
| sampleGPX | Source code |
| sampleLambda | Source code |
| sampleNoise | Source code |
| sampleParams | Source code |
| sampleX | Source code |
| setupChains | Source code |
| sigmoidKernParamInit | Source code |
| sigmoidVarKernCompute | Man page |
| sigmoidVarKernDiagCompute | Man page |
| sigmoidVarKernExpandParam | Man page |
| sigmoidVarKernExtractParam | Man page |
| sigmoidVarKernGradient | Man page |
| sigmoidVarKernParamInit | Man page Source code |
| sigmoidWhiteKernParamInit | Source code |
| solveODE | Man page Source code |
| uniformProposal | Source code |
