sample_tcga: Sample data matrix from the integrated pathway analysis of...
In dendsort: Modular Leaf Ordering Methods for Dendrogram Nodes
Description
Usage
Format
Details
Description
a multivariate table obtained from the integrated pathway analysis of gastric cancer from the Cancer Genome Atlas (TCGA) study.
In this data set, each column represents a pathway consisting of a set of genes and each row represents a cohort of samples based
on specific clinical or genetic features. For each pair of a pathway and a feature, a continuous value of between 1 and -1 is
assigned to score positive or negative association, respectively.
Usage
1
Format
A data frame with 215 rows and 117 variables
Details
We would like to thank Sheila Reynolds and Vesteinn Thorsson from the Institute for Systems Biology for sharing this sample data set.
dendsort documentation built on April 20, 2021, 5:05 p.m.
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Description Usage Format Details
Description
a multivariate table obtained from the integrated pathway analysis of gastric cancer from the Cancer Genome Atlas (TCGA) study. In this data set, each column represents a pathway consisting of a set of genes and each row represents a cohort of samples based on specific clinical or genetic features. For each pair of a pathway and a feature, a continuous value of between 1 and -1 is assigned to score positive or negative association, respectively.
Usage
1 |
Format
A data frame with 215 rows and 117 variables
Details
We would like to thank Sheila Reynolds and Vesteinn Thorsson from the Institute for Systems Biology for sharing this sample data set.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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