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weighted.cov <- function(x, y, weights = NULL, na.rm = FALSE) {
if (is.null(weights)) weights <- rep(1, length(x))
if (any(is.na(weights))) stop("There are empty values in weights.")
if (na.rm) {
complete <- !(is.na(x) | is.na(y))
x <- x[complete]
y <- y[complete]
weights <- weights[complete]
} else {
if (any(is.na(x) | is.na(y))) stop("There are empty values in x, y or both. \nPlease consider transforming your data (filtering, recoding, imputation, etc.) or set na.rm to TRUE.")
}
mx <- stats::weighted.mean(x, weights)
my <- stats::weighted.mean(y, weights)
cov <- stats::weighted.mean((x - mx) * (y - my), weights)
return(cov)
}
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