dga: Capture-Recapture Estimation using Bayesian Model Averaging

Performs Bayesian model averaging for capture-recapture. This includes code to stratify records, check the strata for suitable overlap to be used for capture-recapture, and some functions to plot the estimated population size.

Author
James Johndrow, Kristian Lum, and Patrick Ball
Date of publication
2015-04-16 19:53:41
Maintainer
Kristian Lum <kl@hrdag.org>
License
GPL (>= 2)
Version
1.2

View on CRAN

Man pages

bma.cr
Bayesiam Model Averaging for Capture-Recapture
cfunction
A Helper Function for make.strata
check.strata
Checks Each Stratum for Suitability for Capture-Recapture
circle
A Helper Function Used in venn3
circle.ind
A Helper Function for venn3
CompLogML
Computes Marginal Likelihoods for Each Clique and Value of...
dga-package
Capture-Recapture Estimation using Bayesian Model Averaging
ellipse
A Helper Function Used by Venn4 to Define the Perimeter of an...
ellipse.ind
A Helper Function Used by Venn4
graphs3
All Decomposable Graphical Models on Three Lists
graphs4
All Decomposable Graphical Models on Four Lists
graphs5
All Decomposable Graphical Models on Five Lists
integer.base.b
Base Converter
makeAdjMatrix
Adjacency Matrix Converter
MakeCompMatrix
Component-wise Matrix of Log Marginal Likelihoods
make.strata
Transforms Records to List Intersection Counts by Stratum
plotPosteriorN
Plots Posterior Distribution of Nmissing
remove.close
A Helper Function to Tell Which Points Are Near the Boundary...
remove.close.ellipse
A Helper Function to Tell Which Points are Near the Boundary...
sfunction
A Helper Function for make.strata.
tmpfun
Another Helper Function.
venn3
Three List Venn Diagram
venn4
Four List Venn Diagram

Files in this package

dga
dga/NAMESPACE
dga/data
dga/data/graphs3.rda
dga/data/graphs5.rda
dga/data/graphs4.rda
dga/R
dga/R/BMAfunctions.R
dga/R/venn_functions.R
dga/R/stratify_functions.R
dga/README.md
dga/MD5
dga/DESCRIPTION
dga/man
dga/man/check.strata.Rd
dga/man/venn3.Rd
dga/man/sfunction.Rd
dga/man/CompLogML.Rd
dga/man/graphs3.Rd
dga/man/ellipse.Rd
dga/man/make.strata.Rd
dga/man/makeAdjMatrix.Rd
dga/man/MakeCompMatrix.Rd
dga/man/ellipse.ind.Rd
dga/man/tmpfun.Rd
dga/man/circle.ind.Rd
dga/man/plotPosteriorN.Rd
dga/man/graphs5.Rd
dga/man/remove.close.ellipse.Rd
dga/man/dga-package.Rd
dga/man/graphs4.Rd
dga/man/remove.close.Rd
dga/man/cfunction.Rd
dga/man/integer.base.b.Rd
dga/man/circle.Rd
dga/man/venn4.Rd
dga/man/bma.cr.Rd