isometry.rel.abs.error: Compute Relative Absolute Isometry Errors

In dgraphs: Data-Derived Graph Construction Utilities

Compute Relative Absolute Isometry Errors

Description

Computes quantiles of pairwise relative absolute errors

\left|\alpha\hat D_{ij}-D_{ij}\right|/D_{ij}.

Usage

isometry.rel.abs.error(
  D.estimated,
  D.true,
  probs = c(0.5, 0.95),
  scale = TRUE,
  true.tol = sqrt(.Machine$double.eps)
)

Arguments

D.estimated	Estimated distance matrix or dist object.
D.true	Ground-truth distance matrix or dist object.
probs	Numeric vector of probabilities passed to stats::quantile().
scale	Logical scalar. If TRUE, use isometry.scale() to optimally rescale estimated distances before computing the error.
true.tol	Non-negative tolerance. Pairs with true distance less than or equal to this value are excluded from relative metrics.

Value

Named numeric vector of relative absolute error quantiles.

Examples

D <- as.matrix(dist(1:4))
isometry.rel.abs.error(1.1 * D, D)

dgraphs documentation built on Aug. 21, 2026, 1:08 a.m.