rank2mapChr: Map SNP positions to ranks within a genomic window
In diemr: Genome Polarization via Diagnostic Index Expectation Maximization
rank2mapChr R Documentation
Map SNP positions to ranks within a genomic window
Description
Determines the start and end positions of SNPs within a sliding window along a chromosome.
Uses a two-pointer approach for efficiency.
Usage
rank2mapChr(x, windowSize)
Arguments
x
A numeric vector of sorted SNP positions.
windowSize
The size of the genomic window in base pairs.
Details
New from Inchworm by Stuart J.E. Baird.
Implemented from diemr 1.4.2
Value
A matrix with two columns:
-
start: The index of the leftmost SNP within the window.
-
end: The index of the rightmost SNP within the window.
diemr documentation built on Dec. 11, 2025, 5:07 p.m.
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| rank2mapChr | R Documentation |
Map SNP positions to ranks within a genomic window
Description
Determines the start and end positions of SNPs within a sliding window along a chromosome. Uses a two-pointer approach for efficiency.
Usage
rank2mapChr(x, windowSize)
Arguments
x |
A numeric vector of sorted SNP positions. |
windowSize |
The size of the genomic window in base pairs. |
Details
New from Inchworm by Stuart J.E. Baird. Implemented from diemr 1.4.2
Value
A matrix with two columns:
-
start: The index of the leftmost SNP within the window. -
end: The index of the rightmost SNP within the window.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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